RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 CPA6Q8N4T0 437 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 ZSWIM2Q8NEG5 633 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 FBXO18Q8NFZ0 1043 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 RASSF8Q8NHQ8 419 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 MRPS31Q92665 395 aaKnown RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 RABGGTAQ92696 567 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 ATP2A3Q93084 1043 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 HVCN1Q96D96 273 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 CALML4Q96GE6 196 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 ZSCAN31Q96LW9 406 aaPredicted RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 RBM15Q96T37 977 aaKnown RBP eCLIP3.76□□□□□ -1.81
XRN1-209ENST00000472625 NTPCRQ9BSD7 190 aaKnown RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 YIPF4Q9BSR8 244 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 RPP25Q9BUL9 199 aaKnown RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 KIFC3Q9BVG8 833 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 ASB7Q9H672 318 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 TASP1Q9H6P5 420 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 RPF1Q9H9Y2 349 aaKnown RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 PARVGQ9HBI0 331 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 PTPRHQ9HD43 1115 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 NDOR1Q9UHB4 597 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 LIMCH1Q9UPQ0 1083 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 INVSQ9Y283 1065 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 MTF2Q9Y483 593 aaPredicted RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 ARID2Q68CP9 1835 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 GPR179Q6PRD1 2367 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 C2orf16Q68DN1 1984 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 CACNA1BQ00975 2339 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 MTMR11A4FU01 709 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 ZNF839A8K0R7 811 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 H0Y626 953 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 I3L4J1 428 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 K7ENM7 598 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 KRIT1O00522 736 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 PLD2O14939 933 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 KIAA0391O15091 583 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 OGTO15294 1046 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 ALDH1A2O94788 518 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 IL18RAPO95256 599 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TRIM16O95361 564 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 CTDNEP1O95476 244 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 NFATC1O95644 943 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 APBB3O95704 486 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 KNG1P01042 644 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 PIGRP01833 764 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 ITGB3P05106 788 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 KRT18P05783 430 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 CSH1P0DML2 217 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 CSH2P0DML3 217 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 CXCL8P10145 99 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 FDPSP14324 419 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 PTPN1P18031 435 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 TGM1P22735 817 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 U2AF2P26368 475 aaKnown RBP eCLIP3.75□□□□□ -1.81
XRN1-209ENST00000472625 GABRR2P28476 465 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 PCSK1P29120 753 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 MPLP40238 635 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 UBA7P41226 1012 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 VIPR2P41587 438 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 PPP3CCP48454 512 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TAF6P49848 677 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 NEK4P51957 841 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 OSTNP61366 133 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 RPL10AP62906 217 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 MYL7Q01449 175 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 DBPQ10586 325 aaPredicted RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 LMAN2Q12907 356 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 HNRNPDQ14103 355 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 ZNF460Q14592 562 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TMEM132DQ14C87 1099 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 POSTNQ15063 836 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 E2F5Q15329 346 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 MAPRE1Q15691 268 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 ME3Q16798 604 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 MGAT5BQ3V5L5 792 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 FIGNQ5HY92 759 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TMEM196Q5HYL7 178 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 SPDYCQ5MJ68 293 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 GPR158Q5T848 1215 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 SPATA1Q5VX52 437 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 CENPPQ6IPU0 288 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 RINT1Q6NUQ1 792 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TSSK4Q6SA08 328 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 STXBP4Q6ZWJ1 553 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 SYT13Q7L8C5 426 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TRMT11Q7Z4G4 463 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 LIMS2Q7Z4I7 341 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 MTDHQ86UE4 582 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 ZC3H18Q86VM9 953 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 TMC8Q8IU68 726 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 ARID3BQ8IVW6 561 aaPredicted RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 TMEM86AQ8N2M4 240 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TXNDC5Q8NBS9 432 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 TMEM161BQ8NDZ6 487 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 LEO1Q8WVC0 666 aaPredicted RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 DLG3Q92796 817 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 FBXW5Q969U6 566 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TCEAL4Q96EI5 215 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 FUBP3Q96I24 572 aaKnown RBP eCLIP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms