RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CNTN1Q12860 1018 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 MAPK8IP2Q13387 824 aaPredicted RBP7.11□□□□□ -1.27
HDAC1-204ENST00000471488 SPIDRQ14159 915 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 IGFBP7Q16270 282 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 KNOP1Q1ED39 458 aaKnown RBP7.11□□□□□ -1.27
HDAC1-204ENST00000471488 DEFB133Q30KQ1 61 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 ARL13BQ3SXY8 428 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 FSCBQ5H9T9 825 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 MANEAQ5SRI9 462 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 PIK3R6Q5UE93 754 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 BSPRYQ5W0U4 402 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 HIST2H2BCQ6DN03 193 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 GUSBP11Q6P575 273 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 SV2AQ7L0J3 742 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 VASH2Q86V25 355 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 FAM217AQ8IXS0 508 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 APCDD1Q8J025 514 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.11□□□□□ -1.27
HDAC1-204ENST00000471488 OR13H1Q8NG92 308 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 WDR36Q8NI36 951 aaKnown RBP7.11□□□□□ -1.27
HDAC1-204ENST00000471488 UBA3Q8TBC4 463 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 LMX1AQ8TE12 382 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 OR8D1Q8WZ84 308 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 TAF4BQ92750 862 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 TMX3Q96JJ7 454 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 FAM129BQ96TA1 746 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 TNMDQ9H2S6 317 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 LRRC4CQ9HCJ2 640 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 NLGN3Q9NZ94 848 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 HESX1Q9UBX0 185 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.11□□□□□ -1.27
HDAC1-204ENST00000471488 USP3Q9Y6I4 520 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 TDRD6O60522 2096 aaKnown RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 A0A1W2PNU3 283 aaPredicted RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 A0A1W2PQU0 124 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 BLACEA4D250 179 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 YJEFN3A6XGL0 299 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 E7ENQ6 273 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 C1QTNF3-AMACRE9PGA6 284 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 H3BM21 787 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 KPNA3O00505 521 aaPredicted RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 CASC3O15234 703 aaKnown RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 EFSO43281 561 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 LATO43561 262 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 ACSL4O60488 711 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 ASS1P00966 412 aaKnown RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 GP1BAP07359 652 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 SRPRAP08240 638 aaKnown RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 JMJD7P0C870 316 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 HGFP14210 728 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 PDGFRAP16234 1089 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 SLC5A2P31639 672 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 AKT2P31751 481 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 DRD3P35462 400 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 TBX4P57082 545 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 OVGP1Q12889 678 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 ELAVL3Q14576 367 aaKnown RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 STK38Q15208 465 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 NR0B2Q15466 257 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 SKIDA1Q1XH10 827 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 ZACNQ401N2 412 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 FAM46CQ5VWP2 391 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 EPM2AIP1Q7L775 607 aaPredicted RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 KIAA0907Q7Z7F0 614 aaPredicted RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 DSG4Q86SJ6 1040 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 C14orf80Q86SX3 495 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 IQCHQ86VS3 1027 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 CIR1Q86X95 450 aaPredicted RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 UNC45BQ8IWX7 931 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 LGI2Q8N0V4 545 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 ZNF276Q8N554 614 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 ZNF557Q8N988 423 aaPredicted RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 FIBINQ8TAL6 211 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 TAS1R2Q8TE23 839 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 JPH3Q8WXH2 748 aaPredicted RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 TATDN2Q93075 761 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 TTC17Q96AE7 1141 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 MYO19Q96H55 970 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 PPP1R13BQ96KQ4 1090 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 MRGPRX3Q96LB0 322 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 PRICKLE1Q96MT3 831 aaPredicted RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 NOX5Q96PH1 765 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 IL12RB2Q99665 862 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 DDX50Q9BQ39 737 aaKnown RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 DUSP23Q9BVJ7 150 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 FOXP3Q9BZS1 431 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 NIF3L1Q9GZT8 377 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 APOBEC3GQ9HC16 384 aaKnown RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 DYRK4Q9NR20 520 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 ABCC13Q9NSE7 274 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 STARD5Q9NSY2 213 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 KLHL11Q9NVR0 708 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 SEPT10Q9P0V9 454 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 ARHGAP20Q9P2F6 1191 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 GULP1Q9UBP9 304 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 PISDQ9UG56 409 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 INTS6Q9UL03 887 aaKnown RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 TPX2Q9ULW0 747 aaKnown RBP7.1□□□□□ -1.27
HDAC1-204ENST00000471488 DMTF1Q9Y222 760 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 FRMD4BQ9Y2L6 1034 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms