RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 CGRRF1Q99675 332 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 TSG101Q99816 390 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 STRA6Q9BX79 667 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 IMPG2Q9BZV3 1241 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 RMND1Q9NWS8 449 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 MARK1Q9P0L2 795 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 SNX9Q9Y5X1 595 aa6.12□□□□□ -1.43
VARS-222ENST00000470953 VPS13CQ709C8 3753 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 PRSS44E7EML9 344 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 F8VP50 259 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 GABRDO14764 452 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 YKT6O15498 198 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 ZNF202O95125 648 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 NR3C1P04150 777 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 SNRPB2P08579 225 aaKnown RBP6.11□□□□□ -1.43
VARS-222ENST00000470953 PRR29P0C7W0 189 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 C7P10643 843 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 CKMT1AP12532 417 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 KRT13P13646 458 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 P4HA1P13674 534 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 CDK11BP21127 795 aaKnown RBP6.11□□□□□ -1.43
VARS-222ENST00000470953 RPL13P26373 211 aaKnown RBP6.11□□□□□ -1.43
VARS-222ENST00000470953 ANXA13P27216 316 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 PIK3CAP42336 1068 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 ZNF132P52740 706 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 PDX1P52945 283 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 NOP14P78316 857 aaKnown RBP6.11□□□□□ -1.43
VARS-222ENST00000470953 CYP24A1Q07973 514 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 CAMK2GQ13555 558 aaPredicted RBP6.11□□□□□ -1.43
VARS-222ENST00000470953 STIM1Q13586 685 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 PSMD6Q15008 389 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 BMT2Q1RMZ1 405 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 ZNF699Q32M78 642 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 NCEH1Q6PIU2 408 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 CRELD2Q6UXH1 353 aaPredicted RBP6.11□□□□□ -1.43
VARS-222ENST00000470953 HTR3DQ70Z44 454 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 EPM2AIP1Q7L775 607 aaPredicted RBP6.11□□□□□ -1.43
VARS-222ENST00000470953 NAGSQ8N159 534 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 TMEM86AQ8N2M4 240 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 C1orf127Q8N9H9 656 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 KIAA0895Q8NCT3 520 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 ZSWIM2Q8NEG5 633 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 CXorf38Q8TB03 319 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 ZNF507Q8TCN5 953 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 MAPK15Q8TD08 544 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 SMARCE1Q969G3 411 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 FUBP3Q96I24 572 aaKnown RBP eCLIP6.11□□□□□ -1.43
VARS-222ENST00000470953 PIWIL1Q96J94 861 aaKnown RBP6.11□□□□□ -1.43
VARS-222ENST00000470953 DUSP9Q99956 384 aaKnown RBP6.11□□□□□ -1.43
VARS-222ENST00000470953 KLF16Q9BXK1 252 aaPredicted RBP6.11□□□□□ -1.43
VARS-222ENST00000470953 DNAI2Q9GZS0 605 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 SNX25Q9H3E2 840 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 SEMA6CQ9H3T2 930 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 GOLPH3LQ9H4A5 285 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 MTG2Q9H4K7 406 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 MMRN2Q9H8L6 949 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 INTS13Q9NVM9 706 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 ELOVL2Q9NXB9 296 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 WDR35Q9P2L0 1181 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 MAGEC2Q9UBF1 373 aaPredicted RBP6.11□□□□□ -1.43
VARS-222ENST00000470953 ACSL6Q9UKU0 697 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 HPSEQ9Y251 543 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 ZDHHC9Q9Y397 364 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 MAP4K5Q9Y4K4 846 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 PCDHGA7Q9Y5G6 932 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 TGP01266 2768 aa6.11□□□□□ -1.43
VARS-222ENST00000470953 ATP8B3O60423 1300 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 EFCAB7A8K855 629 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 EPB41P11171 864 aaKnown RBP6.1□□□□□ -1.43
VARS-222ENST00000470953 DGKAP23743 735 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 NR2F2P24468 414 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 PPP3CCP48454 512 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 LHX1P48742 406 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 ART1P52961 327 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 AP3M2P53677 418 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 CYP27A1Q02318 531 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 STK4Q13043 487 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 DRAP1Q14919 205 aaPredicted RBP6.1□□□□□ -1.43
VARS-222ENST00000470953 MAPRE1Q15691 268 aaKnown RBP6.1□□□□□ -1.43
VARS-222ENST00000470953 SOWAHAQ2M3V2 549 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 CRTC1Q6UUV9 634 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 VSTM1Q6UX27 236 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 SERPINA13PQ6UXR4 307 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 SCARA5Q6ZMJ2 495 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 C4orf50Q6ZRC1 276 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 TMPRSS9Q7Z410 1059 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 ZFAND4Q86XD8 727 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 TOP6BLQ8N6T0 577 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 OR5B17Q8NGF7 314 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 OR6B3Q8NGW1 331 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 OR4C6Q8NH72 309 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 SCAMP5Q8TAC9 235 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 CYB5D2Q8WUJ1 264 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 SYAP1Q96A49 352 aaPredicted RBP6.1□□□□□ -1.43
VARS-222ENST00000470953 PCED1BQ96HM7 432 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 SERAC1Q96JX3 654 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 APOLD1Q96LR9 279 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 SYT15Q9BQS2 421 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 CIPCQ9C0C6 399 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 ABCG4Q9H172 646 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms