RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 GRK6P43250 576 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 PLK1P53350 603 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 C21orf59P57076 290 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 SNX16P57768 344 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 UBE2HP62256 183 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 PTK2Q05397 1052 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 ELAVL3Q14576 367 aaKnown RBP18.04■□□□□ 0.48
COL7A1-208ENST00000470076 CAMK4Q16566 473 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 NCEH1Q6PIU2 408 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 LAYNQ6UX15 382 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 CCNI2Q6ZMN8 369 aaPredicted RBP18.04■□□□□ 0.48
COL7A1-208ENST00000470076 PTPRN2Q92932 1015 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 RNF34Q969K3 372 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 SKA1Q96BD8 255 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 RPL10LQ96L21 214 aaKnown RBP18.04■□□□□ 0.48
COL7A1-208ENST00000470076 PPP1R9BQ96SB3 815 aa18.04■□□□□ 0.48
COL7A1-208ENST00000470076 TPX2Q9ULW0 747 aaKnown RBP18.04■□□□□ 0.48
COL7A1-208ENST00000470076 H0Y8X5 98 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 CAPNS1P04632 268 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 PDGFRAP16234 1089 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 GOT1P17174 413 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 PON1P27169 355 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 PSMD8P48556 350 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 STK19P49842 368 aaPredicted RBP18.03■□□□□ 0.48
COL7A1-208ENST00000470076 CCR5P51681 352 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 APBA1Q02410 837 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 INAVAQ3KP66 663 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 LRSAM1Q6UWE0 723 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 C11orf57Q6ZUT1 292 aaPredicted RBP18.03■□□□□ 0.48
COL7A1-208ENST00000470076 SND1Q7KZF4 910 aaKnown RBP eCLIP18.03■□□□□ 0.48
COL7A1-208ENST00000470076 IRF2BP1Q8IU81 584 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 PASD1Q8IV76 773 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 STK40Q8N2I9 435 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 MLKLQ8NB16 471 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 TOR4AQ9NXH8 423 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 BTBD3Q9Y2F9 522 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 ACACAQ13085 2346 aa18.03■□□□□ 0.48
COL7A1-208ENST00000470076 SYNJ2BP-COX16A0A087WUM0 186 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 C10orf142B7Z368 130 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 KCNK3O14649 394 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 DKK1O94907 266 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 ATXN1LP0C7T5 689 aaKnown RBP18.02■□□□□ 0.48
COL7A1-208ENST00000470076 MZF1P28698 734 aaPredicted RBP18.02■□□□□ 0.48
COL7A1-208ENST00000470076 KRT9P35527 623 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 MTIF2P46199 727 aaKnown RBP18.02■□□□□ 0.48
COL7A1-208ENST00000470076 VASPP50552 380 aaPredicted RBP18.02■□□□□ 0.48
COL7A1-208ENST00000470076 SCAPQ12770 1279 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 KCNT1Q5JUK3 1230 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 CXorf57Q6NSI4 855 aaKnown RBP18.02■□□□□ 0.48
COL7A1-208ENST00000470076 FBXL22Q6P050 247 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 CIR1Q86X95 450 aaPredicted RBP18.02■□□□□ 0.48
COL7A1-208ENST00000470076 PROSER1Q86XN7 944 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 AADATQ8N5Z0 425 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 SLC6A18Q96N87 628 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 RPRD1AQ96P16 312 aaPredicted RBP18.02■□□□□ 0.48
COL7A1-208ENST00000470076 SPAG5Q96R06 1193 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 COX16Q9P0S2 106 aa18.02■□□□□ 0.48
COL7A1-208ENST00000470076 RALYQ9UKM9 306 aaKnown RBP18.02■□□□□ 0.48
COL7A1-208ENST00000470076 GOLGA4Q13439 2230 aaKnown RBP18.02■□□□□ 0.47
COL7A1-208ENST00000470076 CACNA1GO43497 2377 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 ITPR1Q14643 2758 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 TNFSF14O43557 240 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 GRAP2O75791 330 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 IL1BP01584 269 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 NOS2P35228 1153 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 ADPRHP54922 357 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 KCNJ12Q14500 433 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 TPD52L1Q16890 204 aaPredicted RBP18.01■□□□□ 0.47
COL7A1-208ENST00000470076 OR6B2Q6IFH4 312 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 OLFML1Q6UWY5 402 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 FAM183BPQ6ZVS7 135 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 SLC26A9Q7LBE3 791 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 TMPRSS7Q7RTY8 843 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 DSG4Q86SJ6 1040 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 C1orf131Q8NDD1 294 aaKnown RBP18.01■□□□□ 0.47
COL7A1-208ENST00000470076 OR14C36Q8NHC7 312 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 SYNCQ9H7C4 482 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 EBF2Q9HAK2 575 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 DNAJC12Q9UKB3 198 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 NBEAQ8NFP9 2946 aa18.01■□□□□ 0.47
COL7A1-208ENST00000470076 A0A1B0GTQ1 180 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 TAF4O00268 1085 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 DAB1O75553 588 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 ERBB2P04626 1255 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 CD38P28907 300 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 SLC6A3Q01959 620 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 NME3Q13232 169 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 AUHQ13825 339 aaKnown RBP18■□□□□ 0.47
COL7A1-208ENST00000470076 MAN2A1Q16706 1144 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 ZDHHC17Q8IUH5 632 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 FAM114A1Q8IWE2 563 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 ZNF397Q8NF99 534 aaPredicted RBP18■□□□□ 0.47
COL7A1-208ENST00000470076 FRS2Q8WU20 508 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 ELF4Q99607 663 aaPredicted RBP18■□□□□ 0.47
COL7A1-208ENST00000470076 FEM1AQ9BSK4 669 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 CCDC86Q9H6F5 360 aaKnown RBP18■□□□□ 0.47
COL7A1-208ENST00000470076 SIX2Q9NPC8 291 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 AASDHPPTQ9NRN7 309 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 RRN3Q9NYV6 651 aa18■□□□□ 0.47
COL7A1-208ENST00000470076 SLC25A13Q9UJS0 675 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms