RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CCNA1P78396 465 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 SOX4Q06945 474 aaPredicted RBP13.96□□□□□ -0.17
BRCA1-209ENST00000470026 SYPL2Q5VXT5 272 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 FOXB2Q5VYV0 432 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 NAIF1Q69YI7 327 aaPredicted RBP13.96□□□□□ -0.17
BRCA1-209ENST00000470026 FSTL4Q6MZW2 842 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 CES3Q6UWW8 571 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 DHDDSQ86SQ9 333 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 KLHDC8BQ8IXV7 354 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 POU5F2Q8N7G0 328 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 CCNYQ8ND76 341 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 PPP2R3CQ969Q6 453 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 TTC1Q99614 292 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 BRD8Q9H0E9 1235 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 WDR6Q9NNW5 1121 aaKnown RBP13.96□□□□□ -0.17
BRCA1-209ENST00000470026 PIGVQ9NUD9 493 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 IL1RAPL1Q9NZN1 696 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 VANGL2Q9ULK5 521 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 SMIM35A0A1B0GVV1 85 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 NCAM2O15394 837 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 H2AFYO75367 372 aaKnown RBP13.96□□□□□ -0.18
BRCA1-209ENST00000470026 BEST1O76090 585 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 GLDCP23378 1020 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 AKAP5P24588 427 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 ADRA1BP35368 520 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 GMPRP36959 345 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 XIAPP98170 497 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 DGKDQ16760 1214 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 ANKRD20A4Q4UJ75 823 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 UBXN11Q5T124 520 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 VWA5B1Q5TIE3 1220 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 BSPRYQ5W0U4 402 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 RSPH3Q86UC2 560 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 SLC25A41Q8N5S1 370 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 RNF169Q8NCN4 708 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 PGAP3Q96FM1 320 aaPredicted RBP13.96□□□□□ -0.18
BRCA1-209ENST00000470026 OSMRQ99650 979 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 RNF19AQ9NV58 838 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 BFARQ9NZS9 450 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 SEPT10Q9P0V9 454 aa13.96□□□□□ -0.18
BRCA1-209ENST00000470026 COL4A4P53420 1690 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-209ENST00000470026 I6L893 689 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-209ENST00000470026 GABRDO14764 452 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 KIF3CO14782 793 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 STRNO43815 780 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 CREB3O43889 395 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 ERCC2P18074 760 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 CD68P34810 354 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-209ENST00000470026 PEX19P40855 299 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 LILRA4P59901 499 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 TMEM62Q0P6H9 643 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 FSCBQ5H9T9 825 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 RNF220Q5VTB9 566 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 NAPRTQ6XQN6 538 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 CLEC20AQ6ZU45 233 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 RAPH1Q70E73 1250 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 PDZD4Q76G19 769 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-209ENST00000470026 STRA8Q7Z7C7 330 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 PDSS2Q86YH6 399 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 PHTF2Q8N3S3 785 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 NME8Q8N427 588 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 NLGN2Q8NFZ4 835 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 DPF3Q92784 378 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 ZNF669Q96BR6 464 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-209ENST00000470026 HDAC11Q96DB2 347 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 TSC22D3Q99576 134 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 RTKNQ9BST9 563 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 FAM192AQ9GZU8 254 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 GBA3Q9H227 469 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 COG4Q9H9E3 785 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 ANLNQ9NQW6 1124 aa13.95□□□□□ -0.18
BRCA1-209ENST00000470026 FNDC1Q4ZHG4 1894 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-209ENST00000470026 A0A096LPK6 155 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 MAGEB16A2A368 324 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 ARHGAP42A6NI28 874 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 FAM72CH0Y354 149 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 KCNK1O00180 336 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 CASQ2O14958 399 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-209ENST00000470026 MTSS1O43312 755 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 ZBTB14O43829 449 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 HUS1O60921 280 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 BAG2O95816 211 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 CHRM1P11229 460 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-209ENST00000470026 ACAT1P24752 427 aaKnown RBP13.94□□□□□ -0.18
BRCA1-209ENST00000470026 LRPAP1P30533 357 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 NPY2RP49146 381 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 NDUFV1P49821 464 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 MTTPP55157 894 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 RPL26P61254 145 aaKnown RBP13.94□□□□□ -0.18
BRCA1-209ENST00000470026 KLF10Q13118 480 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 OLIG2Q13516 323 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 FAM72AQ5TYM5 149 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 FAM72DQ6L9T8 149 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 FRMD7Q6ZUT3 714 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 HFE2Q6ZVN8 426 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 FAM72BQ86X60 149 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 ZNF781Q8N8C0 355 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 MLPHQ9BV36 600 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-209ENST00000470026 OXCT2Q9BYC2 517 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-209ENST00000470026 FAM49AQ9H0Q0 323 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms