RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 OR10T2Q8NGX3 314 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 GSDMBQ8TAX9 411 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 STK32AQ8WU08 396 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 ATP2A3Q93084 1043 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 QKIQ96PU8 341 aaKnown RBP eCLIP9.66□□□□□ -0.86
TOP3A-203ENST00000469739 NPY6RQ99463 290 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 APBA2Q99767 749 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 DHRS4Q9BTZ2 278 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 TRIM55Q9BYV6 548 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 XPNPEP3Q9NQH7 507 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 CHRAC1Q9NRG0 131 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 NDFIP2Q9NV92 336 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 GTF2IRD1Q9UHL9 959 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 STARD13Q9Y3M8 1113 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 LRRC42Q9Y546 428 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 TRPM7Q96QT4 1865 aa9.66□□□□□ -0.86
TOP3A-203ENST00000469739 SCAMP3O14828 347 aaKnown RBP9.65□□□□□ -0.86
TOP3A-203ENST00000469739 B4GALT3O60512 393 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 LRIG2O94898 1065 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 AVPR1AP37288 418 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 ALDH18A1P54886 795 aaKnown RBP9.65□□□□□ -0.86
TOP3A-203ENST00000469739 KDSRQ06136 332 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 ZBTB17Q13105 803 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 DDR2Q16832 855 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 GALNTL6Q49A17 601 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 TFAP2DQ7Z6R9 452 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 SAPCD2Q86UD0 394 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 TAC4Q86UU9 113 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 LONP2Q86WA8 852 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 RASSF3Q86WH2 238 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 ZDHHC17Q8IUH5 632 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 RBM12BQ8IXT5 1001 aaKnown RBP9.65□□□□□ -0.86
TOP3A-203ENST00000469739 ZNF276Q8N554 614 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 ACVR1CQ8NER5 493 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 UTP4Q969X6 686 aaKnown RBP9.65□□□□□ -0.86
TOP3A-203ENST00000469739 FCRL3Q96P31 734 aaPredicted RBP9.65□□□□□ -0.86
TOP3A-203ENST00000469739 KATNAL1Q9BW62 490 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 COLEC11Q9BWP8 271 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 SUDS3Q9H7L9 328 aaPredicted RBP9.65□□□□□ -0.86
TOP3A-203ENST00000469739 ARL8BQ9NVJ2 186 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 PPARGC1AQ9UBK2 798 aaKnown RBP9.65□□□□□ -0.86
TOP3A-203ENST00000469739 TRPV2Q9Y5S1 764 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 NT5C1B-RDH14C9J2C7 533 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 ENTPD5O75356 428 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 GCATO75600 419 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 UNC5CO95185 931 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 C1QAP02745 245 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 T-ENOLP0DO92 83 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 NFKB1P19838 968 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 AXLP30530 894 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 CDC42EP1Q00587 391 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 MTA1Q13330 715 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 PCSK7Q16549 785 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 NOMO2Q5JPE7 1267 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 FAM219BQ5XKK7 198 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 RGMBQ6NW40 437 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 TMEM154Q6P9G4 183 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 STRADAQ7RTN6 431 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 SDCCAG8Q86SQ7 713 aaPredicted RBP9.65□□□□□ -0.86
TOP3A-203ENST00000469739 ZNF280BQ86YH2 543 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 TOP6BLQ8N6T0 577 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 OXNAD1Q96HP4 312 aaPredicted RBP9.65□□□□□ -0.86
TOP3A-203ENST00000469739 FAM161BQ96MY7 647 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 PLEKHG4BQ96PX9 1271 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 MTG1Q9BT17 334 aaPredicted RBP9.65□□□□□ -0.86
TOP3A-203ENST00000469739 ZFYVE28Q9HCC9 887 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 ARHGEF3Q9NR81 526 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 USP3Q9Y6I4 520 aa9.65□□□□□ -0.86
TOP3A-203ENST00000469739 SDR42E2A6NKP2 422 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 ZSCAN9O15535 394 aaPredicted RBP9.65□□□□□ -0.87
TOP3A-203ENST00000469739 KRT38O76015 456 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 STK10O94804 968 aaKnown RBP9.65□□□□□ -0.87
TOP3A-203ENST00000469739 TBX18O95935 607 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 WARSP23381 471 aaKnown RBP9.65□□□□□ -0.87
TOP3A-203ENST00000469739 TYK2P29597 1187 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 GRK4P32298 578 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 GLRBP48167 497 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 DYNC1I2Q13409 638 aaKnown RBP9.65□□□□□ -0.87
TOP3A-203ENST00000469739 POU6F1Q14863 301 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 N4BP2L1Q5TBK1 243 aaPredicted RBP9.65□□□□□ -0.87
TOP3A-203ENST00000469739 VWA5B1Q5TIE3 1220 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 IPMKQ8NFU5 416 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 TTC8Q8TAM2 541 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 EBF4Q9BQW3 602 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 TRPV6Q9H1D0 765 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 SPC25Q9HBM1 224 aa9.65□□□□□ -0.87
TOP3A-203ENST00000469739 WDR6Q9NNW5 1121 aaKnown RBP9.65□□□□□ -0.87
TOP3A-203ENST00000469739 PDCD11Q14690 1871 aaKnown RBP9.64□□□□□ -0.87
TOP3A-203ENST00000469739 ITM2AO43736 263 aa9.64□□□□□ -0.87
TOP3A-203ENST00000469739 PMPCBO75439 489 aa9.64□□□□□ -0.87
TOP3A-203ENST00000469739 DAB1O75553 588 aa9.64□□□□□ -0.87
TOP3A-203ENST00000469739 CSPG5O95196 566 aa9.64□□□□□ -0.87
TOP3A-203ENST00000469739 ENO1P06733 434 aaKnown RBP9.64□□□□□ -0.87
TOP3A-203ENST00000469739 PRKAR2AP13861 404 aaKnown RBP9.64□□□□□ -0.87
TOP3A-203ENST00000469739 ETV4P43268 484 aa9.64□□□□□ -0.87
TOP3A-203ENST00000469739 OR1G1P47890 313 aa9.64□□□□□ -0.87
TOP3A-203ENST00000469739 AQP5P55064 265 aa9.64□□□□□ -0.87
TOP3A-203ENST00000469739 PDK1Q15118 436 aa9.64□□□□□ -0.87
TOP3A-203ENST00000469739 RNF220Q5VTB9 566 aa9.64□□□□□ -0.87
TOP3A-203ENST00000469739 TAF2Q6P1X5 1199 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms