RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 SRRM3A6NNA2 597 aaPredicted RBP2.49□□□□□ -2.01
CCDC93-205ENST00000466171 CLCA1A8K7I4 914 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 TPP1O14773 563 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 NPC1O15118 1278 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 ASAP2O43150 1006 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 BUB3O43684 328 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 PLIN1O60240 522 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 PEX14O75381 377 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 NEURL1O76050 574 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 ALDOAP04075 364 aaKnown RBP2.49□□□□□ -2.01
CCDC93-205ENST00000466171 MYL1P05976 194 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 UMODP07911 640 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 SNRNP70P08621 437 aaKnown RBP2.49□□□□□ -2.01
CCDC93-205ENST00000466171 SRGAP2BP0DMP2 458 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 CHRNB2P17787 502 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 CXCR3P49682 368 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 DLX5P56178 289 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 TRAF1Q13077 416 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 MRGPRG-AS1Q2M3A8 158 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 COBLL1Q53SF7 1204 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 SYCP2LQ5T4T6 812 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 C16orf89Q6UX73 402 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 FJX1Q86VR8 437 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 CCDC28AQ8IWP9 274 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 CLIP4Q8N3C7 705 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 ATP11CQ8NB49 1132 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 ENGASEQ8NFI3 743 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 BICD2Q8TD16 824 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 FAM216AQ8WUB2 273 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 KAT2AQ92830 837 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 IGSF21Q96ID5 467 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 SNX27Q96L92 541 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 WDR77Q9BQA1 342 aaPredicted RBP2.49□□□□□ -2.01
CCDC93-205ENST00000466171 MAGEH1Q9H213 219 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 ARNT2Q9HBZ2 717 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 PRDM11Q9NQV5 511 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 IL36RNQ9UBH0 155 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 PLEKHB1Q9UF11 243 aaPredicted RBP2.49□□□□□ -2.01
CCDC93-205ENST00000466171 ZMYND8Q9ULU4 1186 aaPredicted RBP2.49□□□□□ -2.01
CCDC93-205ENST00000466171 DTX4Q9Y2E6 619 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 LMTK3Q96Q04 1460 aa2.49□□□□□ -2.01
CCDC93-205ENST00000466171 ARID4BQ4LE39 1312 aaPredicted RBP2.48□□□□□ -2.01
CCDC93-205ENST00000466171 OR2W5A6NFC9 320 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 A6NNZ2 444 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 RHPN2P1A8MT19 583 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 F8W8V4 182 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 PPP1R3DO95685 299 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 F7P08709 466 aaPredicted RBP2.48□□□□□ -2.01
CCDC93-205ENST00000466171 ALDOCP09972 364 aaKnown RBP2.48□□□□□ -2.01
CCDC93-205ENST00000466171 NBPF7P0C2Y1 421 aaPredicted RBP2.48□□□□□ -2.01
CCDC93-205ENST00000466171 DAOP14920 347 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 PDLIM4P50479 330 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 SELENOVP59797 346 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 ZRSR1Q15695 479 aaKnown RBP2.48□□□□□ -2.01
CCDC93-205ENST00000466171 SLC5A9Q2M3M2 681 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 AAGABQ6PD74 315 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.48□□□□□ -2.01
CCDC93-205ENST00000466171 CHST15Q7LFX5 561 aaPredicted RBP2.48□□□□□ -2.01
CCDC93-205ENST00000466171 PALB2Q86YC2 1186 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 TCP11L2Q8N4U5 519 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 RFLNBQ8N5W9 214 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 ADAMTS14Q8WXS8 1223 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 PHKBQ93100 1093 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 ADAD1Q96M93 576 aaKnown RBP2.48□□□□□ -2.01
CCDC93-205ENST00000466171 EIF2AQ9BY44 585 aaKnown RBP2.48□□□□□ -2.01
CCDC93-205ENST00000466171 B3GNT4Q9C0J1 378 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 PCDHAC1Q9H158 963 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 DDX31Q9H8H2 851 aaKnown RBP2.48□□□□□ -2.01
CCDC93-205ENST00000466171 AS3MTQ9HBK9 375 aa2.48□□□□□ -2.01
CCDC93-205ENST00000466171 NOTCH3Q9UM47 2321 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 DOCK7Q96N67 2140 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 A0A087WZ62 844 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 KCNJ18B7U540 433 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 STMND1H3BQB6 276 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 M0QZQ0 153 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 APAF1O14727 1248 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 KCNJ13O60928 360 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 IGLV2-11P01706 119 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 SERPINB2P05120 415 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 SP1P08047 785 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 MYL3P08590 195 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 RFX5P48382 616 aaPredicted RBP2.47□□□□□ -2.01
CCDC93-205ENST00000466171 NEK3P51956 506 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 POLE2P56282 527 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 TUBA1BP68363 451 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 SHC2P98077 582 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 ACSM2AQ08AH3 577 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 NSUN2Q08J23 767 aaKnown RBP eCLIP2.47□□□□□ -2.01
CCDC93-205ENST00000466171 SEMA5AQ13591 1074 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 GBX1Q14549 363 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 DUSP6Q16828 381 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 CEP85LQ5SZL2 805 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 RAP1GAP2Q684P5 730 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 IL31Q6EBC2 164 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 CCSAPQ6IQ19 270 aaPredicted RBP2.47□□□□□ -2.01
CCDC93-205ENST00000466171 KIAA0408Q6ZU52 694 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 ZNF367Q7RTV3 350 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 KLBQ86Z14 1044 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 RASGRP3Q8IV61 690 aa2.47□□□□□ -2.01
CCDC93-205ENST00000466171 ADGRF3Q8IZF5 1079 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms