RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 MT-ND3P03897 115 aa22.26■■□□□ 1.15
PDLIM2-216ENST00000464275 TTC39BQ5VTQ0 682 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-216ENST00000464275 RNF43Q68DV7 783 aa22.26■■□□□ 1.15
PDLIM2-216ENST00000464275 RSPO2Q6UXX9 243 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-216ENST00000464275 RNF19BQ6ZMZ0 732 aa22.26■■□□□ 1.15
PDLIM2-216ENST00000464275 CELF6Q96J87 481 aaKnown RBP22.26■■□□□ 1.15
PDLIM2-216ENST00000464275 TSGA13Q96PP4 275 aa22.26■■□□□ 1.15
PDLIM2-216ENST00000464275 NAT9Q9BTE0 207 aa22.26■■□□□ 1.15
PDLIM2-216ENST00000464275 OLA1Q9NTK5 396 aaKnown RBP22.26■■□□□ 1.15
PDLIM2-216ENST00000464275 PRKAG3Q9UGI9 489 aa22.26■■□□□ 1.15
PDLIM2-216ENST00000464275 FAM159BA6NKW6 160 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 VGLL3A8MV65 326 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 CCNCP24863 283 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 RPA3P35244 121 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 SKIV2L2P42285 1042 aaKnown RBP22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 TBX4P57082 545 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 MGAT5BQ3V5L5 792 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 LGSNQ5TDP6 509 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 DEFB128Q7Z7B8 93 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 DPF3Q92784 378 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 YY1AP1Q9H869 796 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 RXFP1Q9HBX9 757 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 TLR8Q9NR97 1041 aaKnown RBP22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 SLC27A5Q9Y2P5 690 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 HS3ST4Q9Y661 456 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 LTBP2Q14767 1821 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 WDR27A2RRH5 827 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 E9PAM4 449 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 VNN2O95498 520 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 AP2A1O95782 977 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 MOCS2O96007 188 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 MGAT1P26572 445 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 PBX3P40426 434 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 MLLT6P55198 1093 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 RPL10AP62906 217 aaKnown RBP22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 ZBTB17Q13105 803 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 ARTNQ5T4W7 220 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 TMEM173Q86WV6 379 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 TEKT5Q96M29 485 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 SEPT5Q99719 369 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 GORASP1Q9BQQ3 440 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 BEGAINQ9BUH8 593 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 KLHL14Q9P2G3 628 aa22.25■■□□□ 1.15
PDLIM2-216ENST00000464275 CXorf49A8MYA2 514 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 PGAM1P18669 254 aa22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 CD68P34810 354 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 TUBP50607 506 aa22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 SESN2P58004 480 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 ELF3P78545 371 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 TLE2Q04725 743 aa22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 TRIM60Q495X7 471 aa22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 CASC4Q6P4E1 433 aa22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 TAS1R1Q7RTX1 841 aa22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 ARHGAP12Q8IWW6 846 aa22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 BANPQ8N9N5 519 aa22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 GPR152Q8TDT2 470 aa22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 BCL7CQ8WUZ0 217 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 PAIP2Q9BPZ3 127 aaKnown RBP22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 SMYD2Q9NRG4 433 aa22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 ABCF3Q9NUQ8 709 aa22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 MOCS1Q9NZB8 636 aa22.24■■□□□ 1.15
PDLIM2-216ENST00000464275 WASH4PA8MWX3 477 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 DFFAO00273 331 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 SOAT2O75908 522 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 KRT37O76014 449 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 ATPAF2Q8N5M1 289 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 ATP6V0D2Q8N8Y2 350 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 ZSCAN18Q8TBC5 510 aaPredicted RBP22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 ARNTL2Q8WYA1 636 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 AGAP3Q96P47 875 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 CRISPLD1Q9H336 500 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 FNIP2Q9P278 1114 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 TM9SF1O15321 606 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 PSMD3O43242 534 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 FAM155BO75949 473 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 ALDH1A2O94788 518 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 SNRPAP09012 282 aaKnown RBP22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 NFKB1P19838 968 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 MNX1P50219 401 aaPredicted RBP22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 SLC18A2Q05940 514 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 EFEMP1Q12805 493 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 TAF10Q12962 218 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 BNIP1Q12981 228 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 IKBKEQ14164 716 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 TRIP4Q15650 581 aaPredicted RBP22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 HHATQ5VTY9 493 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 KCTD11Q693B1 232 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 TRMT10BQ6PF06 316 aaKnown RBP22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 RTL3Q8N8U3 475 aaKnown RBP22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 STARD13Q9Y3M8 1113 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 MIA3Q5JRA6 1907 aa22.23■■□□□ 1.15
PDLIM2-216ENST00000464275 ARHGAP42A6NI28 874 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 EFEMP2O95967 443 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 JCHAINP01591 159 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 TAC1P20366 129 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 ALDH7A1P49419 539 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 PRPSAP1Q14558 356 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 SLC1A5Q15758 541 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 PREPLQ4J6C6 727 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms