RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 OXR1Q8N573 874 aa21.44■■□□□ 1.02
CPSF7-209ENST00000463244 CCDC34Q96HJ3 373 aa21.44■■□□□ 1.02
CPSF7-209ENST00000463244 RPL10LQ96L21 214 aaKnown RBP21.44■■□□□ 1.02
CPSF7-209ENST00000463244 NT5C1BQ96P26 610 aa21.44■■□□□ 1.02
CPSF7-209ENST00000463244 SCAND2PQ9GZW5 306 aaPredicted RBP21.44■■□□□ 1.02
CPSF7-209ENST00000463244 PRORYQ9H606 182 aa21.44■■□□□ 1.02
CPSF7-209ENST00000463244 RMND1Q9NWS8 449 aa21.44■■□□□ 1.02
CPSF7-209ENST00000463244 XPO7Q9UIA9 1087 aaKnown RBP21.44■■□□□ 1.02
CPSF7-209ENST00000463244 AK5Q9Y6K8 562 aa21.44■■□□□ 1.02
CPSF7-209ENST00000463244 CALCAP01258 141 aa21.43■■□□□ 1.02
CPSF7-209ENST00000463244 IL1BP01584 269 aa21.43■■□□□ 1.02
CPSF7-209ENST00000463244 MZF1P28698 734 aaPredicted RBP21.43■■□□□ 1.02
CPSF7-209ENST00000463244 RPL34P49207 117 aaKnown RBP21.43■■□□□ 1.02
CPSF7-209ENST00000463244 ILKQ13418 452 aa21.43■■□□□ 1.02
CPSF7-209ENST00000463244 ELAVL3Q14576 367 aaKnown RBP21.43■■□□□ 1.02
CPSF7-209ENST00000463244 RTP5Q14D33 572 aa21.43■■□□□ 1.02
CPSF7-209ENST00000463244 ZNF658Q5TYW1 1059 aaPredicted RBP21.43■■□□□ 1.02
CPSF7-209ENST00000463244 NAPEPLDQ6IQ20 393 aa21.43■■□□□ 1.02
CPSF7-209ENST00000463244 LRRC69Q6ZNQ3 347 aa21.43■■□□□ 1.02
CPSF7-209ENST00000463244 KANSL1Q7Z3B3 1105 aa21.43■■□□□ 1.02
CPSF7-209ENST00000463244 TAC4Q86UU9 113 aa21.43■■□□□ 1.02
CPSF7-209ENST00000463244 LGI2Q8N0V4 545 aa21.43■■□□□ 1.02
CPSF7-209ENST00000463244 PPM1KQ8N3J5 372 aa21.43■■□□□ 1.02
CPSF7-209ENST00000463244 KAT5Q92993 513 aa21.43■■□□□ 1.02
CPSF7-209ENST00000463244 FAM131CQ96AQ9 280 aa21.43■■□□□ 1.02
CPSF7-209ENST00000463244 TBC1D3DA0A087WVF3 549 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 TBC1D3IA0A087WXS9 549 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 TBC1D3EA0A087X179 549 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 TBC1D3KA0A087X1G2 549 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 TRIM49BA6NDI0 452 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 TBC1D3FA6NER0 549 aaPredicted RBP21.42■■□□□ 1.02
CPSF7-209ENST00000463244 TBC1D3LB9A6J9 549 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 TK2O00142 265 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 PMM2O15305 246 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 SART1O43290 800 aaKnown RBP21.42■■□□□ 1.02
CPSF7-209ENST00000463244 PRB1P04280 392 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 TBC1D3HP0C7X1 549 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 DRD3P35462 400 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 STK19P49842 368 aaPredicted RBP21.42■■□□□ 1.02
CPSF7-209ENST00000463244 LRRC63Q05C16 580 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 SYPL2Q5VXT5 272 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 TBC1D3GQ6DHY5 549 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 TBC1D3CQ6IPX1 549 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 BEND5Q7L4P6 421 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 SPATS2Q86XZ4 545 aaKnown RBP21.42■■□□□ 1.02
CPSF7-209ENST00000463244 TBC1D3Q8IZP1 549 aaPredicted RBP21.42■■□□□ 1.02
CPSF7-209ENST00000463244 MFSD2AQ8NA29 543 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 FAM149B1Q96BN6 582 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 ARHGAP20Q9P2F6 1191 aa21.42■■□□□ 1.02
CPSF7-209ENST00000463244 TENM4Q6N022 2769 aa21.41■■□□□ 1.02
CPSF7-209ENST00000463244 APOEP02649 317 aa21.41■■□□□ 1.02
CPSF7-209ENST00000463244 VAV1P15498 845 aa21.41■■□□□ 1.02
CPSF7-209ENST00000463244 TACR2P21452 398 aa21.41■■□□□ 1.02
CPSF7-209ENST00000463244 C19orf57Q0VDD7 668 aa21.41■■□□□ 1.02
CPSF7-209ENST00000463244 RAP1GAP2Q684P5 730 aa21.41■■□□□ 1.02
CPSF7-209ENST00000463244 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.41■■□□□ 1.02
CPSF7-209ENST00000463244 CHSY1Q86X52 802 aa21.41■■□□□ 1.02
CPSF7-209ENST00000463244 SNIP1Q8TAD8 396 aaKnown RBP21.41■■□□□ 1.02
CPSF7-209ENST00000463244 SLC39A7Q92504 469 aa21.41■■□□□ 1.02
CPSF7-209ENST00000463244 SPAG5Q96R06 1193 aa21.41■■□□□ 1.02
CPSF7-209ENST00000463244 METTL14Q9HCE5 456 aaKnown RBP21.41■■□□□ 1.02
CPSF7-209ENST00000463244 ST7Q9NRC1 585 aa21.41■■□□□ 1.02
CPSF7-209ENST00000463244 TJP2Q9UDY2 1190 aa21.41■■□□□ 1.02
CPSF7-209ENST00000463244 ATXN7O15265 892 aaPredicted RBP21.4■■□□□ 1.02
CPSF7-209ENST00000463244 RRP8O43159 456 aaKnown RBP21.4■■□□□ 1.02
CPSF7-209ENST00000463244 C1QL1O75973 258 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 CKMT2P17540 419 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 NNMTP40261 264 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 GPD2P43304 727 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 SLC12A1Q13621 1099 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 ZC3H12AQ5D1E8 599 aaKnown RBP21.4■■□□□ 1.02
CPSF7-209ENST00000463244 PRPF39Q86UA1 669 aaKnown RBP21.4■■□□□ 1.02
CPSF7-209ENST00000463244 IQCHQ86VS3 1027 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 CACTIN-AS1Q8N1I8 211 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 LMO3Q8TAP4 145 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 RFFLQ8WZ73 363 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 BTN2A3PQ96KV6 586 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 GSDMAQ96QA5 445 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 KDM4CQ9H3R0 1056 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 CYTH4Q9UIA0 394 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 RAI2Q9Y5P3 530 aa21.4■■□□□ 1.02
CPSF7-209ENST00000463244 CAPN9O14815 690 aa21.39■■□□□ 1.01
CPSF7-209ENST00000463244 SLC7A4O43246 635 aa21.39■■□□□ 1.01
CPSF7-209ENST00000463244 PLRG1O43660 514 aaKnown RBP21.39■■□□□ 1.01
CPSF7-209ENST00000463244 IGLV3-25P01717 112 aa21.39■■□□□ 1.01
CPSF7-209ENST00000463244 NUDT1P36639 197 aa21.39■■□□□ 1.01
CPSF7-209ENST00000463244 METAP1P53582 386 aa21.39■■□□□ 1.01
CPSF7-209ENST00000463244 GCNT1Q02742 428 aa21.39■■□□□ 1.01
CPSF7-209ENST00000463244 SULT2A1Q06520 285 aa21.39■■□□□ 1.01
CPSF7-209ENST00000463244 OVGP1Q12889 678 aa21.39■■□□□ 1.01
CPSF7-209ENST00000463244 FRS2Q8WU20 508 aa21.39■■□□□ 1.01
CPSF7-209ENST00000463244 BAP1Q92560 729 aa21.39■■□□□ 1.01
CPSF7-209ENST00000463244 TRIM62Q9BVG3 475 aa21.39■■□□□ 1.01
CPSF7-209ENST00000463244 DMTF1Q9Y222 760 aa21.39■■□□□ 1.01
CPSF7-209ENST00000463244 F5H5T6 163 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 MAGEC1O60732 1142 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 RTN2O75298 545 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 ZIC2O95409 532 aaPredicted RBP21.38■■□□□ 1.01
CPSF7-209ENST00000463244 PDGFRAP16234 1089 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 ACP1P24666 158 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms