RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, human

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3A-208	ENST00000463013	CST5	P28325	142 aa	Predicted RBP	4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	CCKBR	P32239	447 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	TRAPPC10	P48553	1259 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	ALDH7A1	P49419	539 aa	Known RBP	4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	DCTN1	Q14203	1278 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	GALNT3	Q14435	633 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	INPP5J	Q15735	1006 aa	Predicted RBP	4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	ZNF260	Q3ZCT1	412 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	LEXM	Q3ZCV2	418 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	C6orf10	Q5SRN2	563 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	TTLL5	Q6EMB2	1281 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	COLCA1	Q6ZS62	124 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	TECPR1	Q7Z6L1	1165 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	PIM3	Q86V86	326 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	TRAPPC12	Q8WVT3	735 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	IP6K1	Q92551	441 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	KAT2A	Q92830	837 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	IL21R	Q9HBE5	538 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	SPAG4	Q9NPE6	437 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	SRP68	Q9UHB9	627 aa	Known RBP	4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	KCND3	Q9UK17	655 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	RCE1	Q9Y256	329 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	PKP3	Q9Y446	797 aa		4.15	□□□□□ -1.75
KDM3A-208	ENST00000463013	hCG_1642624	A0A1W2PR95	340 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	MYMK	A6NI61	221 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	FAM90A20P	A6NIJ5	464 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013		A6NNC1	897 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	FOXO6	A8MYZ6	492 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	PEX14	O75381	377 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	NDUFB8	O95169	186 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	EPN2	O95208	641 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	HOXB9	P17482	250 aa	Predicted RBP	4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	PRPH2	P23942	346 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	STAT1	P42224	750 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	CDK18	Q07002	472 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	TIGD6	Q17RP2	521 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	ARL13A	Q5H913	290 aa	Predicted RBP	4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	TTC39A	Q5SRH9	613 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	MANEA	Q5SRI9	462 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	ASPHD1	Q5U4P2	390 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	ANKS1B	Q7Z6G8	1248 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	TMEM200A	Q86VY9	491 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	KLB	Q86Z14	1044 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	MYCT1	Q8N699	235 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	OR6Y1	Q8NGX8	325 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	CENPI	Q92674	756 aa	Predicted RBP	4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	ARRDC3	Q96B67	414 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	NLRP4	Q96MN2	994 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	PAGR1	Q9BTK6	254 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	SAYSD1	Q9NPB0	183 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	G6PC2	Q9NQR9	355 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	SLC22A11	Q9NSA0	550 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	FBXO4	Q9UKT5	387 aa		4.14	□□□□□ -1.75
KDM3A-208	ENST00000463013	TMEM272	A0A1B0GTI8	110 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013		H3BNX3	289 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	NEURL1	O76050	574 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	TOMM40	O96008	361 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	LCK	P06239	509 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	CHRNB1	P11230	501 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	SCP2	P22307	547 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	TKT	P29401	623 aa	Known RBP	4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	OAZ1	P54368	228 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	PRKAA2	P54646	552 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	RHAG	Q02094	409 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	PDCL	Q13371	301 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	SMAD1	Q15797	465 aa	Known RBP	4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	SLC30A9	Q6PML9	568 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	RFX8	Q6ZV50	586 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	B4GALNT4	Q76KP1	1039 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	GALNT15	Q8N3T1	639 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	RUBCN	Q92622	972 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	SLC25A28	Q96A46	364 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	ARPC5L	Q9BPX5	153 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	HDHD5	Q9BXW7	423 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	ARHGAP39	Q9C0H5	1083 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	PTPRH	Q9HD43	1115 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	ARL15	Q9NXU5	204 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	SLC25A13	Q9UJS0	675 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	ANAPC4	Q9UJX5	808 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	SQOR	Q9Y6N5	450 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	CACNA1I	Q9P0X4	2223 aa		4.13	□□□□□ -1.75
KDM3A-208	ENST00000463013	NPIPB13	A6NJU9	1138 aa		4.12	□□□□□ -1.75
KDM3A-208	ENST00000463013	NPIPB5	A8MRT5	1133 aa		4.12	□□□□□ -1.75
KDM3A-208	ENST00000463013		B4DGG1	531 aa		4.12	□□□□□ -1.75
KDM3A-208	ENST00000463013	NPIPB4	C9JG80	1138 aa		4.12	□□□□□ -1.75
KDM3A-208	ENST00000463013		E7EVH7	732 aa		4.12	□□□□□ -1.75
KDM3A-208	ENST00000463013	TCEA3	O75764	348 aa		4.12	□□□□□ -1.75
KDM3A-208	ENST00000463013	FAM155B	O75949	473 aa		4.12	□□□□□ -1.75
KDM3A-208	ENST00000463013	SYF2	O95926	243 aa	Known RBP	4.12	□□□□□ -1.75
KDM3A-208	ENST00000463013	TFRC	P02786	760 aa	Known RBP	4.12	□□□□□ -1.75
KDM3A-208	ENST00000463013	PKM	P14618	531 aa	Known RBP	4.12	□□□□□ -1.75
KDM3A-208	ENST00000463013	CHN1	P15882	459 aa		4.12	□□□□□ -1.75
KDM3A-208	ENST00000463013	CHRNA5	P30532	468 aa		4.12	□□□□□ -1.75
KDM3A-208	ENST00000463013	GRK6	P43250	576 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms