RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 CHADO15335 359 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 MYL4P12829 197 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 OAS2P29728 719 aaKnown RBP15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 MAGEA6P43360 314 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 SLC20A2Q08357 652 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 ZNF844Q08AG5 666 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 PABPC1LQ4VXU2 614 aaKnown RBP15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 ADGRD2Q7Z7M1 963 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 CCDC13Q8IYE1 715 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 KRT222Q8N1A0 295 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 CFAP52Q8N1V2 620 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 ZNF419Q96HQ0 510 aaPredicted RBP15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 PRICKLE1Q96MT3 831 aaPredicted RBP15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 PBX4Q9BYU1 374 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 FOXP3Q9BZS1 431 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 H3BNC9 293 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 MAFKO60675 156 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 ACSL3O95573 720 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 MAGEA4P43358 317 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 HARS2P49590 506 aaKnown RBP15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 SGSHP51688 502 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 C5orf22Q49AR2 442 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 TRMT10CQ7L0Y3 403 aaKnown RBP15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 RELL1Q8IUW5 271 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 UMODL1-AS1Q8N2C9 162 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 LZTR1Q8N653 840 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 ARL8AQ96BM9 186 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 GORASP1Q9BQQ3 440 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 BRD8Q9H0E9 1235 aa15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 AGO1Q9UL18 857 aaKnown RBP15.38■□□□□ 0.05
RPRD1B-203ENST00000462548 GREM1O60565 184 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 HDCP19113 662 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 PSMB4P28070 264 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 CD68P34810 354 aaPredicted RBP15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 PAPOLAP51003 745 aaKnown RBP15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 PDIA2Q13087 525 aaKnown RBP15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 SEMA5AQ13591 1074 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 LRIG3Q6UXM1 1119 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 AGGF1Q8N302 714 aaeCLIP15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 MAB21L3Q8N8X9 362 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 TSGA13Q96PP4 275 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 TSPYL1Q9H0U9 437 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 NKX2-4Q9H2Z4 354 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 ATXN3LQ9H3M9 355 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 CPQQ9Y646 472 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 F5H5T6 163 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 NDC80O14777 642 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 ZBTB24O43167 697 aaPredicted RBP15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 LPXNO60711 386 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 OPHN1O60890 802 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 TTC4O95801 387 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 APRTP07741 180 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 NUDT17P0C025 328 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 SLC11A2P49281 568 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 SMAD3P84022 425 aaKnown RBP15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 HIF1AQ16665 826 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 CEP85LQ5SZL2 805 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 DENND2CQ68D51 928 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 C4orf22Q6V702 233 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 ZNF534Q76KX8 674 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 PID1Q7Z2X4 250 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 RBM23Q86U06 439 aaKnown RBP15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 ATPAF2Q8N5M1 289 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 USP33Q8TEY7 942 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 MRPS31Q92665 395 aaKnown RBP15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 TCEAL4Q96EI5 215 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 HMCESQ96FZ2 354 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 NOTCH4Q99466 2003 aa15.37■□□□□ 0.05
RPRD1B-203ENST00000462548 E7ESA3 106 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 ALOX15BO15296 676 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 AVILO75366 819 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 MOSPD3O75425 235 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 JCHAINP01591 159 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 GRIA1P42261 906 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 RPS24P62847 133 aaKnown RBP15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 TTMPQ5BVD1 217 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 CAND1Q86VP6 1230 aaKnown RBP15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 ANKMY2Q8IV38 441 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 ELMOD1Q8N336 334 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 CNTD1Q8N815 330 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 AZIN2Q96A70 460 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 SAMD11Q96NU1 681 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 SERPINB12Q96P63 405 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 ASAH2Q9NR71 780 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 KLHL8Q9P2G9 620 aaPredicted RBP15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 DNMT3BQ9UBC3 853 aaKnown RBP15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 ZFP37Q9Y6Q3 630 aaPredicted RBP15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 CDH23Q9H251 3354 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 STK10O94804 968 aaKnown RBP15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 CCNCP24863 283 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 ARL4CP56559 192 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 ZNF697Q5TEC3 545 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 CENPUQ71F23 418 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 ZBED8Q8IZ13 594 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 OR52K2Q8NGK3 314 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 SHKBP1Q8TBC3 707 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 EXOC4Q96A65 974 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 AGAP3Q96P47 875 aa15.36■□□□□ 0.05
RPRD1B-203ENST00000462548 RUFY1Q96T51 708 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms