RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 AMPD1P23109 780 aa19.74■□□□□ 0.75
XPA-202ENST00000462523 CTNNA2P26232 953 aa19.74■□□□□ 0.75
XPA-202ENST00000462523 ZNF135P52742 658 aaPredicted RBP19.74■□□□□ 0.75
XPA-202ENST00000462523 GRSF1Q12849 480 aaKnown RBP eCLIP19.74■□□□□ 0.75
XPA-202ENST00000462523 PDK2Q15119 407 aa19.74■□□□□ 0.75
XPA-202ENST00000462523 SETD3Q86TU7 594 aaPredicted RBP19.74■□□□□ 0.75
XPA-202ENST00000462523 SUGP1Q8IWZ8 645 aaKnown RBP19.74■□□□□ 0.75
XPA-202ENST00000462523 CCDC105Q8IYK2 499 aa19.74■□□□□ 0.75
XPA-202ENST00000462523 KATNAL2Q8IYT4 538 aa19.74■□□□□ 0.75
XPA-202ENST00000462523 ZNF670Q9BS34 389 aa19.74■□□□□ 0.75
XPA-202ENST00000462523 CALN1Q9BXU9 219 aa19.74■□□□□ 0.75
XPA-202ENST00000462523 KIAA1522Q9P206 1035 aaPredicted RBP19.74■□□□□ 0.75
XPA-202ENST00000462523 RCOR3Q9P2K3 495 aaPredicted RBP19.74■□□□□ 0.75
XPA-202ENST00000462523 AMFRQ9UKV5 643 aa19.74■□□□□ 0.75
XPA-202ENST00000462523 TBC1D3BA6NDS4 549 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 DDX3YO15523 660 aaKnown RBP19.73■□□□□ 0.75
XPA-202ENST00000462523 ARL4AP40617 200 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 MAPKAPK2P49137 400 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 ANKRD20A8PQ5CZ79 823 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 EMC10Q5UCC4 262 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 MFSD7Q6UXD7 560 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 C17orf53Q8N3J3 647 aaPredicted RBP19.73■□□□□ 0.75
XPA-202ENST00000462523 NPWQ8N729 165 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 FLCNQ8NFG4 579 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 PCDH19Q8TAB3 1148 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 RNF25Q96BH1 459 aaPredicted RBP19.73■□□□□ 0.75
XPA-202ENST00000462523 HES6Q96HZ4 224 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 FEM1AQ9BSK4 669 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 RETREG1Q9H6L5 497 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 CATSPERBQ9H7T0 1116 aa19.73■□□□□ 0.75
XPA-202ENST00000462523 DDX56Q9NY93 547 aaKnown RBP19.73■□□□□ 0.75
XPA-202ENST00000462523 NYNRINQ9P2P1 1898 aaKnown RBP19.72■□□□□ 0.75
XPA-202ENST00000462523 PI15O43692 258 aa19.72■□□□□ 0.75
XPA-202ENST00000462523 RHOCP08134 193 aa19.72■□□□□ 0.75
XPA-202ENST00000462523 KIR2DL1P43626 348 aaPredicted RBP19.72■□□□□ 0.75
XPA-202ENST00000462523 TAZQ16635 292 aa19.72■□□□□ 0.75
XPA-202ENST00000462523 PLEKHG6Q3KR16 790 aa19.72■□□□□ 0.75
XPA-202ENST00000462523 PITRM1Q5JRX3 1037 aa19.72■□□□□ 0.75
XPA-202ENST00000462523 ZFYVE27Q5T4F4 411 aa19.72■□□□□ 0.75
XPA-202ENST00000462523 C6orf118Q5T5N4 469 aa19.72■□□□□ 0.75
XPA-202ENST00000462523 RNF219Q5W0B1 726 aaPredicted RBP19.72■□□□□ 0.75
XPA-202ENST00000462523 AHI1Q8N157 1196 aa19.72■□□□□ 0.75
XPA-202ENST00000462523 PQLC3Q8N755 202 aa19.72■□□□□ 0.75
XPA-202ENST00000462523 ZNF557Q8N988 423 aaPredicted RBP19.72■□□□□ 0.75
XPA-202ENST00000462523 NETO2Q8NC67 525 aa19.72■□□□□ 0.75
XPA-202ENST00000462523 SORCS1Q8WY21 1168 aa19.72■□□□□ 0.75
XPA-202ENST00000462523 MRPS17Q9Y2R5 130 aaKnown RBP19.72■□□□□ 0.75
XPA-202ENST00000462523 ATG2BQ96BY7 2078 aa19.72■□□□□ 0.75
XPA-202ENST00000462523 ILVBLA1L0T0 632 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 CCDC66A2RUB6 948 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 DAPK3O43293 454 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 PLK1P53350 603 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 MEI1Q5TIA1 1274 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 DCAF12L1Q5VU92 463 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 Q6ZS52 159 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 MAP7D3Q8IWC1 876 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 CCDC117Q8IWD4 279 aaPredicted RBP19.71■□□□□ 0.75
XPA-202ENST00000462523 TP53INP2Q8IXH6 220 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 UMODL1-AS1Q8N2C9 162 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 TRIM58Q8NG06 486 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 OR7D4Q8NG98 312 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 PSMB7Q99436 277 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 MFSD1Q9H3U5 465 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 ZDHHC4Q9NPG8 344 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 KCND1Q9NSA2 647 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.71■□□□□ 0.75
XPA-202ENST00000462523 STARD13Q9Y3M8 1113 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 CUL9Q8IWT3 2517 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 NUP205Q92621 2012 aa19.71■□□□□ 0.75
XPA-202ENST00000462523 FAM86C2PA6NEL3 165 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 ZNF487B1APH4 448 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 STK25O00506 426 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 ACVRL1P37023 503 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 CDKN2BP42772 138 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 TNFRSF4P43489 277 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 SEC13P55735 322 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 GNA12Q03113 381 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 SLC12A1Q13621 1099 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 GAS6Q14393 721 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 PREPLQ4J6C6 727 aaPredicted RBP19.7■□□□□ 0.74
XPA-202ENST00000462523 AFMIDQ63HM1 303 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 MBLAC2Q68D91 279 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 PKN3Q6P5Z2 889 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 VSIG1Q86XK7 387 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 ARHGAP12Q8IWW6 846 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 EXD1Q8NHP7 514 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 WFIKKN2Q8TEU8 576 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 EXOC4Q96A65 974 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 TTC17Q96AE7 1141 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 CLDN23Q96B33 292 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 RNF157Q96PX1 679 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 ALS2CR12Q96Q35 445 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 NELL2Q99435 816 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 OSBPL6Q9BZF3 934 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 LRRC19Q9H756 370 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 LMAN1LQ9HAT1 526 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 ELOVL2Q9NXB9 296 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 DLGAP2Q9P1A6 1054 aa19.7■□□□□ 0.74
XPA-202ENST00000462523 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.7■□□□□ 0.74
XPA-202ENST00000462523 SIT1Q9Y3P8 196 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms