RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 COPAP53621 1224 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 GFPT1Q06210 699 aaPredicted RBP16.3■□□□□ 0.2
ERCC3-206ENST00000462306 CAMK2GQ13555 558 aaPredicted RBP16.3■□□□□ 0.2
ERCC3-206ENST00000462306 MAP7D1Q3KQU3 841 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 CCDC122Q5T0U0 273 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 SCYL2Q6P3W7 929 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 SLFN11Q7Z7L1 901 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 SETD3Q86TU7 594 aaPredicted RBP16.3■□□□□ 0.2
ERCC3-206ENST00000462306 KBTBD6Q86V97 674 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 PGBD3Q8N328 593 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 ZNF366Q8N895 744 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 KDM1BQ8NB78 822 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 RLN3Q8WXF3 142 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 ZC3H10Q96K80 434 aaKnown RBP16.3■□□□□ 0.2
ERCC3-206ENST00000462306 CHP1Q99653 195 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 ZYG11BQ9C0D3 744 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 MKRN2Q9H000 416 aaKnown RBP16.3■□□□□ 0.2
ERCC3-206ENST00000462306 SLC6A17Q9H1V8 727 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 MRPL47Q9HD33 250 aaKnown RBP16.3■□□□□ 0.2
ERCC3-206ENST00000462306 ZNHIT6Q9NWK9 470 aaKnown RBP16.3■□□□□ 0.2
ERCC3-206ENST00000462306 FZD10Q9ULW2 581 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 NEU3Q9UQ49 428 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 AKR1B15C9JRZ8 316 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-206ENST00000462306 SYNCRIPO60506 623 aaKnown RBP16.29■□□□□ 0.2
ERCC3-206ENST00000462306 LRIG2O94898 1065 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 CYP1A2P05177 515 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 SRPRAP08240 638 aaKnown RBP16.29■□□□□ 0.2
ERCC3-206ENST00000462306 C7P10643 843 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 GALCP54803 685 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 ECT2LQ008S8 904 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 SLC18A3Q16572 532 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 TSR1Q2NL82 804 aaKnown RBP16.29■□□□□ 0.2
ERCC3-206ENST00000462306 PLK5Q496M5 336 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 RNF219Q5W0B1 726 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-206ENST00000462306 LAIR1Q6GTX8 287 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 TFAP2DQ7Z6R9 452 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 CNGA4Q8IV77 575 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 PYROXD2Q8N2H3 581 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 FAM160A2Q8N612 972 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-206ENST00000462306 FRMD1Q8N878 549 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 ARHGEF26Q96DR7 871 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 MRFAP1L1Q96HT8 127 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 DUSP15Q9H1R2 295 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-206ENST00000462306 SLCO3A1Q9UIG8 710 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 RAB23Q9ULC3 237 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 DOCK4Q8N1I0 1966 aa16.29■□□□□ 0.2
ERCC3-206ENST00000462306 EP300Q09472 2414 aaPredicted RBP16.28■□□□□ 0.2
ERCC3-206ENST00000462306 ZBTB24O43167 697 aaPredicted RBP16.28■□□□□ 0.2
ERCC3-206ENST00000462306 RHOCP08134 193 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 DESP17661 470 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 BCKDHBP21953 392 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 OR1E1P30953 314 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 L1CAMP32004 1257 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 STK19P49842 368 aaPredicted RBP16.28■□□□□ 0.2
ERCC3-206ENST00000462306 AIF1P55008 147 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 ST8SIA6P61647 398 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 SULT2A1Q06520 285 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 SEMA3BQ13214 749 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 HNRNPA1L2Q32P51 320 aaKnown RBP16.28■□□□□ 0.2
ERCC3-206ENST00000462306 EFHC2Q5JST6 749 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 CYP4V2Q6ZWL3 525 aaPredicted RBP16.28■□□□□ 0.2
ERCC3-206ENST00000462306 METTL3Q86U44 580 aaKnown RBP16.28■□□□□ 0.2
ERCC3-206ENST00000462306 NLRP14Q86W24 1093 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 TMPRSS6Q8IU80 811 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 TC2NQ8N9U0 490 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 RUBCNQ92622 972 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 RPL10LQ96L21 214 aaKnown RBP16.28■□□□□ 0.2
ERCC3-206ENST00000462306 PEBP4Q96S96 227 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 PPP1R9BQ96SB3 815 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 PSMB7Q99436 277 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 MTG2Q9H4K7 406 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 PRSS16Q9NQE7 514 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 SUN2Q9UH99 717 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 MBD1Q9UIS9 605 aaPredicted RBP16.28■□□□□ 0.2
ERCC3-206ENST00000462306 FAM186AA6NE01 2351 aa16.28■□□□□ 0.2
ERCC3-206ENST00000462306 A0A0D9SEW6 157 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 ILVBLA1L0T0 632 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 TTC34A8MYJ7 566 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 LRCH4O75427 683 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 RHOQP17081 205 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 VASPP50552 380 aaPredicted RBP16.27■□□□□ 0.2
ERCC3-206ENST00000462306 C6orf118Q5T5N4 469 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.27■□□□□ 0.2
ERCC3-206ENST00000462306 DCLK2Q8N568 766 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 OR2T3Q8NH03 318 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 TBC1D31Q96DN5 1066 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 NUP85Q9BW27 656 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 PACSIN1Q9BY11 444 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 MUC3BQ9H195 1237 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 RETREG1Q9H6L5 497 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 NHEJ1Q9H9Q4 299 aaPredicted RBP16.27■□□□□ 0.2
ERCC3-206ENST00000462306 PRDM16Q9HAZ2 1276 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 CD93Q9NPY3 652 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 NDFIP2Q9NV92 336 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 TMEM248Q9NWD8 314 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 VPS28Q9UK41 221 aa16.27■□□□□ 0.2
ERCC3-206ENST00000462306 GVINP1Q7Z2Y8 2422 aa16.27■□□□□ 0.19
ERCC3-206ENST00000462306 PLXND1Q9Y4D7 1925 aa16.26■□□□□ 0.19
ERCC3-206ENST00000462306 AKR1B10O60218 316 aa16.26■□□□□ 0.19
ERCC3-206ENST00000462306 ZNF217O75362 1048 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms