RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 TYRP14679 529 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 ACVRL1P37023 503 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 CDH18Q13634 790 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 PDGFRLQ15198 375 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 AAK1Q2M2I8 961 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 AFMIDQ63HM1 303 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 ARHGAP36Q6ZRI8 547 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 ZNF572Q7Z3I7 529 aaPredicted RBP13.84□□□□□ -0.19
PBRM1-219ENST00000462207 ZC3H18Q86VM9 953 aaKnown RBP13.84□□□□□ -0.19
PBRM1-219ENST00000462207 C12orf40Q86WS4 652 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 MFN1Q8IWA4 741 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 KIAA1958Q8N8K9 716 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 OR7D4Q8NG98 312 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 OLFM3Q96PB7 478 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 DDX47Q9H0S4 455 aaKnown RBP13.84□□□□□ -0.19
PBRM1-219ENST00000462207 LRRC19Q9H756 370 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 GTSE1Q9NYZ3 720 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 DNPEPQ9ULA0 475 aa13.84□□□□□ -0.19
PBRM1-219ENST00000462207 MYOFQ9NZM1 2061 aa13.83□□□□□ -0.19
PBRM1-219ENST00000462207 PRUNE2Q8WUY3 3088 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 NYNRINQ9P2P1 1898 aaKnown RBP13.83□□□□□ -0.2
PBRM1-219ENST00000462207 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.83□□□□□ -0.2
PBRM1-219ENST00000462207 A0A0D9SEW6 157 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 H0Y626 953 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 TRIM24O15164 1050 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 LIASO43766 372 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 RHOCP08134 193 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 ADH5P11766 374 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 KCNJ1P48048 391 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 MAPKAPK2P49137 400 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 EIF3EP60228 445 aaKnown RBP13.83□□□□□ -0.2
PBRM1-219ENST00000462207 ZNF177Q13360 481 aaPredicted RBP13.83□□□□□ -0.2
PBRM1-219ENST00000462207 GAB4Q2WGN9 574 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 RNF43Q68DV7 783 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 NAIF1Q69YI7 327 aaPredicted RBP13.83□□□□□ -0.2
PBRM1-219ENST00000462207 ASTLQ6HA08 431 aaPredicted RBP13.83□□□□□ -0.2
PBRM1-219ENST00000462207 KLHL7Q8IXQ5 586 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 UMODL1-AS1Q8N2C9 162 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 NAT16Q8N8M0 369 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 SLC35B2Q8TB61 432 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 MAIP1Q8WWC4 291 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 ATP2A3Q93084 1043 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 HMCESQ96FZ2 354 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 LGMNQ99538 433 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 TRMT61BQ9BVS5 477 aaKnown RBP13.83□□□□□ -0.2
PBRM1-219ENST00000462207 KCNK12Q9HB15 430 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 MARK1Q9P0L2 795 aa13.83□□□□□ -0.2
PBRM1-219ENST00000462207 GOLGA6L10A0A0M3HER8 536 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 RASA4BC9J798 803 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 ARNTLO00327 626 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 RASA4O43374 803 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 RAMP2O60895 175 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 PHF2O75151 1096 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 NFATC1O95644 943 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 MZF1P28698 734 aaPredicted RBP13.82□□□□□ -0.2
PBRM1-219ENST00000462207 SERPINB6P35237 376 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 MRPS25P82663 173 aaKnown RBP13.82□□□□□ -0.2
PBRM1-219ENST00000462207 GALNT2Q10471 571 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 MPP7Q5T2T1 576 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 TTC13Q8NBP0 860 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 MAGOHBQ96A72 148 aaKnown RBP13.82□□□□□ -0.2
PBRM1-219ENST00000462207 ECT2Q9H8V3 914 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 PRDM16Q9HAZ2 1276 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 TBC1D30Q9Y2I9 924 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 SPTBN5Q9NRC6 3674 aaKnown RBP13.82□□□□□ -0.2
PBRM1-219ENST00000462207 H7C0C1 242 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 MCF2LO15068 1137 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 CHADO15335 359 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 HOXC11O43248 304 aaPredicted RBP13.82□□□□□ -0.2
PBRM1-219ENST00000462207 ADH1CP00326 375 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 VAV1P15498 845 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 CD70P32970 193 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 CSKP41240 450 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 ATP5OP48047 213 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 PAPOLAP51003 745 aaKnown RBP13.82□□□□□ -0.2
PBRM1-219ENST00000462207 GNA12Q03113 381 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 LMAN2Q12907 356 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 CYP1B1Q16678 543 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 C6orf118Q5T5N4 469 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 RNF219Q5W0B1 726 aaPredicted RBP13.82□□□□□ -0.2
PBRM1-219ENST00000462207 C12orf50Q8NA57 414 aaPredicted RBP13.82□□□□□ -0.2
PBRM1-219ENST00000462207 NOA1Q8NC60 698 aaKnown RBP13.82□□□□□ -0.2
PBRM1-219ENST00000462207 THEGQ9P2T0 379 aa13.82□□□□□ -0.2
PBRM1-219ENST00000462207 CTAGE15A4D2H0 777 aa13.81□□□□□ -0.2
PBRM1-219ENST00000462207 RIOK3O14730 519 aaKnown RBP13.81□□□□□ -0.2
PBRM1-219ENST00000462207 CTAGE8P0CG41 777 aa13.81□□□□□ -0.2
PBRM1-219ENST00000462207 RBP3P10745 1247 aa13.81□□□□□ -0.2
PBRM1-219ENST00000462207 GLDCP23378 1020 aa13.81□□□□□ -0.2
PBRM1-219ENST00000462207 HLA-FP30511 346 aa13.81□□□□□ -0.2
PBRM1-219ENST00000462207 GARSP41250 739 aaKnown RBP13.81□□□□□ -0.2
PBRM1-219ENST00000462207 SOX9P48436 509 aa13.81□□□□□ -0.2
PBRM1-219ENST00000462207 NR2C2P49116 596 aa13.81□□□□□ -0.2
PBRM1-219ENST00000462207 NDST2P52849 883 aa13.81□□□□□ -0.2
PBRM1-219ENST00000462207 NRLP54845 237 aa13.81□□□□□ -0.2
PBRM1-219ENST00000462207 MESP2Q0VG99 397 aa13.81□□□□□ -0.2
PBRM1-219ENST00000462207 RUNX3Q13761 415 aa13.81□□□□□ -0.2
PBRM1-219ENST00000462207 POLD3Q15054 466 aaPredicted RBP13.81□□□□□ -0.2
PBRM1-219ENST00000462207 OASLQ15646 514 aaKnown RBP13.81□□□□□ -0.2
PBRM1-219ENST00000462207 CCNG2Q16589 344 aa13.81□□□□□ -0.2
PBRM1-219ENST00000462207 PUS10Q3MIT2 529 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms