RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 ARHGAP20Q9P2F6 1191 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 CFAP45Q9UL16 551 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 KIAA1257Q9ULG3 409 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 DMTF1Q9Y222 760 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 HPSEQ9Y251 543 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 COQ4Q9Y3A0 265 aa11.23□□□□□ -0.61
CBX3-205ENST00000462165 TBC1D3DA0A087WVF3 549 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 TBC1D3IA0A087WXS9 549 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 TBC1D3EA0A087X179 549 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 TBC1D3KA0A087X1G2 549 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 TBC1D3FA6NER0 549 aaPredicted RBP11.22□□□□□ -0.61
CBX3-205ENST00000462165 TBC1D3LB9A6J9 549 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 J3QKU1 62 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 IL1BP01584 269 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 LTFP02788 710 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 TBC1D3HP0C7X1 549 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 EPB41P11171 864 aaKnown RBP11.22□□□□□ -0.61
CBX3-205ENST00000462165 PFKFB1P16118 471 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 CMA1P23946 247 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 MZF1P28698 734 aaPredicted RBP11.22□□□□□ -0.61
CBX3-205ENST00000462165 DRD3P35462 400 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 E2F1Q01094 437 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 KCNH2Q12809 1159 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 DPYDQ12882 1025 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 NNTQ13423 1086 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 EDRF1Q3B7T1 1238 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 CBWD6Q4V339 395 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 DCAF6Q58WW2 860 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 CBWD3Q5JTY5 395 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 CBWD5Q5RIA9 395 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 TBC1D3GQ6DHY5 549 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 TBC1D3CQ6IPX1 549 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 PMF1Q6P1K2 205 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 LCLAT1Q6UWP7 414 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.22□□□□□ -0.61
CBX3-205ENST00000462165 TBC1D3Q8IZP1 549 aaPredicted RBP11.22□□□□□ -0.61
CBX3-205ENST00000462165 UBR7Q8N806 425 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 ZNF248Q8NDW4 579 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 SLC39A13Q96H72 371 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 RPL10LQ96L21 214 aaKnown RBP11.22□□□□□ -0.61
CBX3-205ENST00000462165 FCRL2Q96LA5 508 aaPredicted RBP11.22□□□□□ -0.61
CBX3-205ENST00000462165 ZNF578Q96N58 590 aaPredicted RBP11.22□□□□□ -0.61
CBX3-205ENST00000462165 SERPINB11Q96P15 392 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 LGMNQ99538 433 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 NUCKS1Q9H1E3 243 aaKnown RBP11.22□□□□□ -0.61
CBX3-205ENST00000462165 CYTH4Q9UIA0 394 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 SLCO3A1Q9UIG8 710 aa11.22□□□□□ -0.61
CBX3-205ENST00000462165 SLC7A4O43246 635 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 PLRG1O43660 514 aaKnown RBP11.21□□□□□ -0.61
CBX3-205ENST00000462165 SIGLEC6O43699 453 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 MT-CO3P00414 261 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 FYNP06241 537 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 PYGBP11216 843 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 NNMTP40261 264 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 RGS7P49802 495 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 PCBP4P57723 403 aaKnown RBP11.21□□□□□ -0.61
CBX3-205ENST00000462165 RHDQ02161 417 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 ZNF211Q13398 564 aaPredicted RBP11.21□□□□□ -0.61
CBX3-205ENST00000462165 ELAVL3Q14576 367 aaKnown RBP11.21□□□□□ -0.61
CBX3-205ENST00000462165 RNF219Q5W0B1 726 aaPredicted RBP11.21□□□□□ -0.61
CBX3-205ENST00000462165 KDM7AQ6ZMT4 941 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 TRIM69Q86WT6 500 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 APCDD1Q8J025 514 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 CFAP52Q8N1V2 620 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 DQX1Q8TE96 717 aaKnown RBP11.21□□□□□ -0.61
CBX3-205ENST00000462165 CLEC4CQ8WTT0 213 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 HSFY1Q96LI6 401 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 SPAG5Q96R06 1193 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 TLR6Q9Y2C9 796 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 CEP83Q9Y592 693 aa11.21□□□□□ -0.61
CBX3-205ENST00000462165 MYO18BQ8IUG5 2567 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 PIK3R2O00459 728 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 TRIM38O00635 465 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 CETN3O15182 167 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 SDC3O75056 442 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 DXOO77932 396 aaKnown RBP11.2□□□□□ -0.62
CBX3-205ENST00000462165 FBXO21O94952 628 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 PAEPP09466 180 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 TBXAS1P24557 533 aaPredicted RBP11.2□□□□□ -0.62
CBX3-205ENST00000462165 STK19P49842 368 aaPredicted RBP11.2□□□□□ -0.62
CBX3-205ENST00000462165 UCNP55089 124 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 TMPRSS3P57727 454 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
CBX3-205ENST00000462165 SLC12A1Q13621 1099 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 STAT4Q14765 748 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 STILQ15468 1287 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 TAF1BQ53T94 588 aaPredicted RBP11.2□□□□□ -0.62
CBX3-205ENST00000462165 TCERG1LQ5VWI1 586 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 CDCP2Q5VXM1 449 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 LSMEM2Q8N112 164 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 SLC25A45Q8N413 288 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 OR4C6Q8NH72 309 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 TFAP2BQ92481 460 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 HIC2Q96JB3 615 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
CBX3-205ENST00000462165 PCDHB1Q9Y5F3 818 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 MAST4O15021 2626 aa11.2□□□□□ -0.62
CBX3-205ENST00000462165 COL27A1Q8IZC6 1860 aaPredicted RBP11.19□□□□□ -0.62
CBX3-205ENST00000462165 FAM237AA0A1B0GTK4 181 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 PRAMEF26H0Y7S4 382 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms