RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 THOC5Q13769 683 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 MRPL58Q14197 206 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 GPNMBQ14956 572 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PCSK7Q16549 785 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 RNF219Q5W0B1 726 aaPredicted RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CCNJLQ8IV13 435 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CARNMT1Q8N4J0 409 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 GLIS1Q8NBF1 620 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 HJURPQ8NCD3 748 aaPredicted RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 EPS8L3Q8TE67 593 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 BCL7CQ8WUZ0 217 aaPredicted RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 SREK1Q8WXA9 508 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF669Q96BR6 464 aaPredicted RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PLD4Q96BZ4 506 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 LRRC39Q96DD0 335 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 TMA16Q96EY4 203 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 APOL2Q9BQE5 337 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CLSTN3Q9BQT9 956 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CINPQ9BW66 212 aaPredicted RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 MAGEB5Q9BZ81 275 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CWH43Q9H720 699 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ATP13A1Q9HD20 1204 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 WDR6Q9NNW5 1121 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 SENP1Q9P0U3 644 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PSMC3IPQ9P2W1 217 aaPredicted RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 VPS28Q9UK41 221 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 MAFFQ9ULX9 164 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 HAX1O00165 279 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 TNFRSF10BO14763 440 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 CCL16O15467 120 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 FGF19O95750 216 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC4A1P02730 911 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 FYNP06241 537 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 POLBP06746 335 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 ABHD2P08910 425 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 CNPP09543 421 aaKnown RBP4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 NFKB1P19838 968 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 BMPR1AP36894 532 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 RECQLP46063 649 aaPredicted RBP4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 IFNAR2P48551 515 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 YBEYP58557 167 aaPredicted RBP4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 RING1Q06587 406 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 KDELC2Q7Z4H8 507 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 TCEAL8Q8IYN2 117 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 CNPY4Q8N129 248 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 PPHLN1Q8NEY8 458 aaKnown RBP4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 PHOSPHO2Q8TCD6 241 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 POF1BQ8WVV4 589 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 NT5C3BQ969T7 300 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 PKMYT1Q99640 499 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 TMBIM4Q9HC24 238 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 ALG13Q9NP73 1137 aaKnown RBP4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 TLR9Q9NR96 1032 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 UBP1Q9NZI7 540 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 ZFATQ9P243 1243 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC8A2Q9UPR5 921 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 CPQQ9Y646 472 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 HS3ST4Q9Y661 456 aa4.21□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF840PA6NDX5 716 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 FAM72CH0Y354 149 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 CBX4O00257 560 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 ALOX15BO15296 676 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 BNIP3LO60238 219 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 CLDN11O75508 207 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 ATXN8OSP0DMR3 200 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TSHRP16473 764 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TPSB2P20231 275 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 SSTR1P30872 391 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 MMP13P45452 471 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 MAPKAPK2P49137 400 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 KCNQ1P51787 676 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 NRLP54845 237 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 GEMIN4P57678 1058 aaKnown RBP4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 PPIDQ08752 370 aaKnown RBP4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 GALNT2Q10471 571 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 DPYSQ14117 519 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TPSAB1Q15661 275 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TCTN1Q2MV58 587 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 PARP15Q460N3 678 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TEX44Q53QW1 395 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 FAM72AQ5TYM5 149 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 ANKRD22Q5VYY1 191 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TTC19Q6DKK2 380 aaPredicted RBP4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 FAM72DQ6L9T8 149 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 RFWD3Q6PCD5 774 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 MICALCLQ6ZW33 695 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 RASSF3Q86WH2 238 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 LRRC6Q86X45 466 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 FAM72BQ86X60 149 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 CFAP52Q8N1V2 620 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 ARL14EPQ8N8R7 260 aaPredicted RBP4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 MAB21L3Q8N8X9 362 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 MCUQ8NE86 351 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 FBF1Q8TES7 1133 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 PDCD6IPQ8WUM4 868 aaKnown RBP4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 HDAC11Q96DB2 347 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 FICDQ9BVA6 458 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 RABEP2Q9H5N1 569 aa4.21□□□□□ -1.74
ATP13A3-206ENST00000461660 TLE6Q9H808 572 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms