RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 KATNAL2Q8IYT4 538 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 APCDD1Q8J025 514 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 SYCE1Q8N0S2 351 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 PJA1Q8NG27 643 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 ALG3Q92685 438 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 FAF2Q96CS3 445 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 NELL2Q99435 816 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 FEM1AQ9BSK4 669 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 OSBPL6Q9BZF3 934 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 RBM12Q9NTZ6 932 aaKnown RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 ETNK2Q9NVF9 386 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 KIAA1522Q9P206 1035 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 RCOR3Q9P2K3 495 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 DNAI1Q9UI46 699 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 PACSIN2Q9UNF0 486 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 STARD13Q9Y3M8 1113 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 MFHAS1Q9Y4C4 1052 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 MUC22E2RYF6 1773 aaPredicted RBP11.58□□□□□ -0.56
SSBP1-202ENST00000461433 TBC1D3BA6NDS4 549 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 H3BRJ5 948 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 DCLK1O15075 740 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 FGF10O15520 208 aaPredicted RBP11.58□□□□□ -0.56
SSBP1-202ENST00000461433 DDX3YO15523 660 aaKnown RBP11.58□□□□□ -0.56
SSBP1-202ENST00000461433 ARL4AP40617 200 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 TNFRSF4P43489 277 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 KIR2DL1P43626 348 aaPredicted RBP11.58□□□□□ -0.56
SSBP1-202ENST00000461433 MAPKAPK2P49137 400 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 KRT81Q14533 505 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 TAZQ16635 292 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 ANKRD20A8PQ5CZ79 823 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 PEX26Q7Z412 305 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 BMP8AQ7Z5Y6 402 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 ZNF557Q8N988 423 aaPredicted RBP11.58□□□□□ -0.56
SSBP1-202ENST00000461433 PCDH19Q8TAB3 1148 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 TTC17Q96AE7 1141 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 CLDN23Q96B33 292 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 HES6Q96HZ4 224 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 PSMB7Q99436 277 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 ZNF670Q9BS34 389 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 CATSPERBQ9H7T0 1116 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 LMAN1LQ9HAT1 526 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 KCND1Q9NSA2 647 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 DDX56Q9NY93 547 aaKnown RBP11.58□□□□□ -0.56
SSBP1-202ENST00000461433 DLGAP2Q9P1A6 1054 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 AMFRQ9UKV5 643 aa11.58□□□□□ -0.56
SSBP1-202ENST00000461433 MRPS17Q9Y2R5 130 aaKnown RBP11.58□□□□□ -0.56
SSBP1-202ENST00000461433 MYO18AQ92614 2054 aaKnown RBP11.58□□□□□ -0.56
SSBP1-202ENST00000461433 NYNRINQ9P2P1 1898 aaKnown RBP11.57□□□□□ -0.56
SSBP1-202ENST00000461433 ILVBLA1L0T0 632 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 CCDC66A2RUB6 948 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 LRRD1A4D1F6 860 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 ZNF487B1APH4 448 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 STK25O00506 426 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 KRT1P04264 644 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 RHOCP08134 193 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 NUMBP49757 651 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 SLC12A1Q13621 1099 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 PLEKHG6Q3KR16 790 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 PREPLQ4J6C6 727 aaPredicted RBP11.57□□□□□ -0.56
SSBP1-202ENST00000461433 PITRM1Q5JRX3 1037 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 C6orf118Q5T5N4 469 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 MEI1Q5TIA1 1274 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 RNF219Q5W0B1 726 aaPredicted RBP11.57□□□□□ -0.56
SSBP1-202ENST00000461433 AFMIDQ63HM1 303 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 MFSD7Q6UXD7 560 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 VSIG1Q86XK7 387 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 MAP7D3Q8IWC1 876 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 AHI1Q8N157 1196 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 UMODL1-AS1Q8N2C9 162 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 NPWQ8N729 165 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 PQLC3Q8N755 202 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 FLCNQ8NFG4 579 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 SORCS1Q8WY21 1168 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 ARHGEF2Q92974 986 aaKnown RBP11.57□□□□□ -0.56
SSBP1-202ENST00000461433 EXOC4Q96A65 974 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 RNF25Q96BH1 459 aaPredicted RBP11.57□□□□□ -0.56
SSBP1-202ENST00000461433 RNF157Q96PX1 679 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 CALN1Q9BXU9 219 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 MFSD1Q9H3U5 465 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 LRRC19Q9H756 370 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 ELOVL2Q9NXB9 296 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 SIT1Q9Y3P8 196 aa11.57□□□□□ -0.56
SSBP1-202ENST00000461433 MIF4GDA9UHW6 222 aaKnown RBP11.56□□□□□ -0.56
SSBP1-202ENST00000461433 DAPK3O43293 454 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 AOC1P19801 751 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 ACVRL1P37023 503 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 CDKN2BP42772 138 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 CTSOP43234 321 aaPredicted RBP11.56□□□□□ -0.56
SSBP1-202ENST00000461433 CLCN5P51795 746 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 OXCT1P55809 520 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 GNA12Q03113 381 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 GAS6Q14393 721 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 DMC1Q14565 340 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 PTPRNQ16849 979 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 DGKKQ5KSL6 1271 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 DCAF12L1Q5VU92 463 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 MBLAC2Q68D91 279 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 PKN3Q6P5Z2 889 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 ZNF783Q6ZMS7 281 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 Q6ZS52 159 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms