RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CENPUQ71F23 418 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 TFAP2DQ7Z6R9 452 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 ZNF567Q8N184 647 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 DEPDC1BQ8WUY9 529 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 CYP2S1Q96SQ9 504 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 NOL6Q9H6R4 1146 aaKnown RBP25.04■■□□□ 1.6
U2AF1-204ENST00000459639 MED4Q9NPJ6 270 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 DNAJC17Q9NVM6 304 aaKnown RBP25.04■■□□□ 1.6
U2AF1-204ENST00000459639 SMPD4Q9NXE4 827 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 MSRAQ9UJ68 235 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 STOML2Q9UJZ1 356 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 EIF3HO15372 352 aaKnown RBP eCLIP25.03■■□□□ 1.6
U2AF1-204ENST00000459639 RIPK2O43353 540 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 RFPL2O75678 378 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 POU2F2P09086 479 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 NUDT17P0C025 328 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 PTPN2P17706 415 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 TPSB2P20231 275 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 FAM193AP78312 1265 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 SLC7A9P82251 487 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 TPSAB1Q15661 275 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 ADGRF1Q5T601 910 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 DENND2CQ68D51 928 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 TIGD7Q6NT04 549 aaPredicted RBP25.03■■□□□ 1.6
U2AF1-204ENST00000459639 ELMSAN1Q6PJG2 1045 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 KRT222Q8N1A0 295 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 LEMD2Q8NC56 503 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 IGSF9Q9P2J2 1179 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 TRHDEQ9UKU6 1024 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 AGO1Q9UL18 857 aaKnown RBP25.03■■□□□ 1.6
U2AF1-204ENST00000459639 CPQQ9Y646 472 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 MYO18AQ92614 2054 aaKnown RBP25.03■■□□□ 1.6
U2AF1-204ENST00000459639 CHD5Q8TDI0 1954 aa25.03■■□□□ 1.6
U2AF1-204ENST00000459639 TRAV19A0A0A6YYK7 116 aa25.02■■□□□ 1.6
U2AF1-204ENST00000459639 A0A1W2PRU2 124 aa25.02■■□□□ 1.6
U2AF1-204ENST00000459639 H0YGN5 161 aa25.02■■□□□ 1.6
U2AF1-204ENST00000459639 XYLBO75191 536 aa25.02■■□□□ 1.6
U2AF1-204ENST00000459639 PARP6Q2NL67 630 aa25.02■■□□□ 1.6
U2AF1-204ENST00000459639 FAXCQ5TGI0 409 aa25.02■■□□□ 1.6
U2AF1-204ENST00000459639 MYEOVQ96EZ4 313 aa25.02■■□□□ 1.6
U2AF1-204ENST00000459639 NKX2-4Q9H2Z4 354 aa25.02■■□□□ 1.6
U2AF1-204ENST00000459639 ZDHHC7Q9NXF8 308 aa25.02■■□□□ 1.6
U2AF1-204ENST00000459639 KLHL8Q9P2G9 620 aaPredicted RBP25.02■■□□□ 1.6
U2AF1-204ENST00000459639 NFS1Q9Y697 457 aa25.02■■□□□ 1.6
U2AF1-204ENST00000459639 GOLGA8MH3BSY2 632 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 MAFKO60675 156 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 HSP90B2PQ58FF3 399 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 FAM182AQ5T1J6 154 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 PPP2R2DQ66LE6 453 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 RFWD3Q6PCD5 774 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 MAB21L3Q8N8X9 362 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 ADAMTS19Q8TE59 1207 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 WBP2Q969T9 261 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 SAYSD1Q9NPB0 183 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 HCFC1R1Q9NWW0 138 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 ARHGAP42A6NI28 874 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 E7ESA3 106 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 OPA1O60313 960 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 TTC4O95801 387 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 CKMP06732 381 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 APRTP07741 180 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 DDX6P26196 483 aaKnown RBP eCLIP25.01■■□□□ 1.59
U2AF1-204ENST00000459639 MAGEA4P43358 317 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 PAPOLAP51003 745 aaKnown RBP25.01■■□□□ 1.59
U2AF1-204ENST00000459639 EIF3BP55884 814 aaKnown RBP25.01■■□□□ 1.59
U2AF1-204ENST00000459639 IFI35P80217 286 aaPredicted RBP25.01■■□□□ 1.59
U2AF1-204ENST00000459639 GAD2Q05329 585 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 ZBTB17Q13105 803 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 CBLBQ13191 982 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 TEX44Q53QW1 395 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 ARHGAP36Q6ZRI8 547 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 PID1Q7Z2X4 250 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 PDIK1LQ8N165 341 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 MCUQ8NE86 351 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 PRICKLE1Q96MT3 831 aaPredicted RBP25.01■■□□□ 1.59
U2AF1-204ENST00000459639 SH3GL2Q99962 352 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 CEP41Q9BYV8 373 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 EIF2B3Q9NR50 452 aaKnown RBP25.01■■□□□ 1.59
U2AF1-204ENST00000459639 NINJ2Q9NZG7 142 aa25.01■■□□□ 1.59
U2AF1-204ENST00000459639 DOCK6Q96HP0 2047 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 NOTCH4Q99466 2003 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 MYO7AQ13402 2215 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 RASA4BC9J798 803 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 E7EVH7 732 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 MATN3O15232 486 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 RASA4O43374 803 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 CDH4P55283 916 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 YBEYP58557 167 aaPredicted RBP25■■□□□ 1.59
U2AF1-204ENST00000459639 PARP15Q460N3 678 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 TTC39BQ5VTQ0 682 aaPredicted RBP25■■□□□ 1.59
U2AF1-204ENST00000459639 ITPRIPL1Q6GPH6 555 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 Q6ZNB5 142 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 CIR1Q86X95 450 aaPredicted RBP25■■□□□ 1.59
U2AF1-204ENST00000459639 ZSCAN18Q8TBC5 510 aaPredicted RBP25■■□□□ 1.59
U2AF1-204ENST00000459639 FATE1Q969F0 183 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 TTC25Q96NG3 672 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 CERS4Q9HA82 394 aa25■■□□□ 1.59
U2AF1-204ENST00000459639 DNMT3BQ9UBC3 853 aaKnown RBP25■■□□□ 1.59
U2AF1-204ENST00000459639 LSM7Q9UK45 103 aaKnown RBP25■■□□□ 1.59
U2AF1-204ENST00000459639 HCFC2Q9Y5Z7 792 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms