RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 POLIQ9UNA4 740 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 FER1L5A0AVI2 2057 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 MYCP01106 439 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 MAPK3P27361 379 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ALDH18A1P54886 795 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PSMD5Q16401 504 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 IZUMO2Q6UXV1 221 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CHAC2Q8WUX2 184 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 OXNAD1Q96HP4 312 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 DDX43Q9NXZ2 648 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SPATA31A6Q5VVP1 1343 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 KBTBD13C9JR72 458 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 RBP3P10745 1247 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PDGFRAP16234 1089 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 GRK4P32298 578 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CXCR5P32302 372 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 GMPSP49915 693 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 GNA12Q03113 381 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ILF3Q12906 894 aaKnown RBP eCLIP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 EIF3MQ7L2H7 374 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CHST3Q7LGC8 479 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 OR56A4Q8NGH8 313 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 RAB6BQ9NRW1 208 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 A0A0A0MRY4 1105 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 NBPF26B4DH59 902 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 RTN3O95197 1032 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ADAMTS2O95450 1211 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 NPPAP01160 153 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 HMGCRP04035 888 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 AP2S1P53680 142 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 POU5F1Q01860 360 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 OASLQ15646 514 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ZSWIM7Q19AV6 140 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PLEKHN1Q494U1 663 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ERAP2Q6P179 960 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 NIPA1Q7RTP0 329 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ADAMTSL2Q86TH1 951 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 NAT16Q8N8M0 369 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 STRBPQ96SI9 672 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 KCTD14Q9BQ13 255 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TMEM121Q9BTD3 319 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 DDX47Q9H0S4 455 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CLN6Q9NWW5 311 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SIX4Q9UIU6 781 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 MRTO4Q9UKD2 239 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ITGA11Q9UKX5 1188 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TOGARAM1Q9Y4F4 1720 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 NALCNQ8IZF0 1738 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CLDN25C9JDP6 229 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 F8W810 466 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 KCNN4O15554 427 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 GUCY1A2P33402 732 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CCNHP51946 323 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 PLEKHG6Q3KR16 790 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 LRRC24Q50LG9 513 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ERMARDQ5T6L9 678 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 LMBRD2Q68DH5 695 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CYP2U1Q7Z449 544 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CHPFQ8IZ52 775 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 DCP1BQ8IZD4 617 aaKnown RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CENPLQ8N0S6 344 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 FSTL5Q8N475 847 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 PPP1R16AQ96I34 528 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 PPP3R2Q96LZ3 170 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 SERPINB11Q96P15 392 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 FBXO2Q9UK22 296 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 PSMD13Q9UNM6 376 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 FANCMQ8IYD8 2048 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 SYNDIG1LA6NDD5 238 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 NPM3O75607 178 aaKnown RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CAMTA2O94983 1202 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 GYPCP04921 128 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 C2orf80Q0P641 193 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 LPIN1Q14693 890 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 KLHL17Q6TDP4 642 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF358Q9NW07 568 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 TAS2R13Q9NYV9 303 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 MORF4L1Q9UBU8 362 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 PGRMC2O15173 223 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 HOXD10P28358 340 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ALDH9A1P49189 494 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 OAZ1P54368 228 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 NCOA4Q13772 614 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 NFIL3Q16649 462 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 TMEM192Q8IY95 271 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 C9orf72Q96LT7 481 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 CYLDQ9NQC7 956 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 STK32BQ9NY57 414 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 AASSQ9UDR5 926 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 BTN3A3O00478 584 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 SEC24AO95486 1093 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 GH1P01241 217 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ENO3P13929 434 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 COILP38432 576 aaPredicted RBP5.3□□□□□ -1.56
CSMD3-204ENST00000455883 TIMM10P62072 90 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 PRKG2Q13237 762 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 ZFP69Q49AA0 526 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 SULT1C3Q6IMI6 304 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 SLC25A25Q6KCM7 469 aa5.3□□□□□ -1.56
CSMD3-204ENST00000455883 TMA16Q96EY4 203 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms