RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 NUCKS1Q9H1E3 243 aaKnown RBP24.03■■□□□ 1.44
PTPRA-208ENST00000455631 ARHGAP20Q9P2F6 1191 aa24.03■■□□□ 1.44
PTPRA-208ENST00000455631 CYTH4Q9UIA0 394 aa24.03■■□□□ 1.44
PTPRA-208ENST00000455631 MYO18BQ8IUG5 2567 aa24.03■■□□□ 1.44
PTPRA-208ENST00000455631 B8ZZF3 427 aa24.02■■□□□ 1.44
PTPRA-208ENST00000455631 PIK3R2O00459 728 aa24.02■■□□□ 1.44
PTPRA-208ENST00000455631 LUC7L3O95232 432 aaKnown RBP24.02■■□□□ 1.44
PTPRA-208ENST00000455631 SETSIPP0DME0 302 aa24.02■■□□□ 1.44
PTPRA-208ENST00000455631 RPL13P26373 211 aaKnown RBP24.02■■□□□ 1.44
PTPRA-208ENST00000455631 DRD3P35462 400 aa24.02■■□□□ 1.44
PTPRA-208ENST00000455631 METAP1P53582 386 aa24.02■■□□□ 1.44
PTPRA-208ENST00000455631 OVGP1Q12889 678 aa24.02■■□□□ 1.44
PTPRA-208ENST00000455631 LSMEM2Q8N112 164 aa24.02■■□□□ 1.44
PTPRA-208ENST00000455631 SCML4Q8N228 414 aa24.02■■□□□ 1.44
PTPRA-208ENST00000455631 DEPDC7Q96QD5 511 aa24.02■■□□□ 1.44
PTPRA-208ENST00000455631 MAPK8IP1Q9UQF2 711 aa24.02■■□□□ 1.44
PTPRA-208ENST00000455631 DMTF1Q9Y222 760 aa24.02■■□□□ 1.44
PTPRA-208ENST00000455631 DOCK9Q9BZ29 2069 aa24.01■■□□□ 1.43
PTPRA-208ENST00000455631 FFAR2O15552 330 aa24.01■■□□□ 1.43
PTPRA-208ENST00000455631 KLK10O43240 276 aa24.01■■□□□ 1.43
PTPRA-208ENST00000455631 RTN2O75298 545 aa24.01■■□□□ 1.43
PTPRA-208ENST00000455631 C6P13671 934 aa24.01■■□□□ 1.43
PTPRA-208ENST00000455631 NUMBP49757 651 aa24.01■■□□□ 1.43
PTPRA-208ENST00000455631 RGS7P49802 495 aa24.01■■□□□ 1.43
PTPRA-208ENST00000455631 STK19P49842 368 aaPredicted RBP24.01■■□□□ 1.43
PTPRA-208ENST00000455631 MS4A13Q5J8X5 152 aa24.01■■□□□ 1.43
PTPRA-208ENST00000455631 SLC25A45Q8N413 288 aa24.01■■□□□ 1.43
PTPRA-208ENST00000455631 AZIN2Q96A70 460 aa24.01■■□□□ 1.43
PTPRA-208ENST00000455631 CA5BQ9Y2D0 317 aa24.01■■□□□ 1.43
PTPRA-208ENST00000455631 USP12O75317 370 aa24■■□□□ 1.43
PTPRA-208ENST00000455631 VAV1P15498 845 aa24■■□□□ 1.43
PTPRA-208ENST00000455631 NUDT1P36639 197 aa24■■□□□ 1.43
PTPRA-208ENST00000455631 KCNC4Q03721 635 aa24■■□□□ 1.43
PTPRA-208ENST00000455631 ADAM9Q13443 819 aa24■■□□□ 1.43
PTPRA-208ENST00000455631 POM121L1PQ3SYA9 428 aa24■■□□□ 1.43
PTPRA-208ENST00000455631 TMC6Q7Z403 805 aa24■■□□□ 1.43
PTPRA-208ENST00000455631 APCDD1Q8J025 514 aa24■■□□□ 1.43
PTPRA-208ENST00000455631 OR4C6Q8NH72 309 aa24■■□□□ 1.43
PTPRA-208ENST00000455631 FCRL2Q96LA5 508 aaPredicted RBP24■■□□□ 1.43
PTPRA-208ENST00000455631 KDM4CQ9H3R0 1056 aa24■■□□□ 1.43
PTPRA-208ENST00000455631 O00370 1275 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 ARHGAP6O43182 974 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 PLRG1O43660 514 aaKnown RBP23.99■■□□□ 1.43
PTPRA-208ENST00000455631 OPA1O60313 960 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 DXOO77932 396 aaKnown RBP23.99■■□□□ 1.43
PTPRA-208ENST00000455631 MOCS2O96007 188 aaPredicted RBP23.99■■□□□ 1.43
PTPRA-208ENST00000455631 LTFP02788 710 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 NNMTP40261 264 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 ERVPABLB-1P60509 514 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 CUL2Q13617 745 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 DCAF6Q58WW2 860 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 CDCP2Q5VXM1 449 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 CLEC4CQ8WTT0 213 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 IRGQQ8WZA9 623 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 TTC9Q92623 222 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 EEF2KMTQ96G04 330 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 KLHDC7BQ96G42 594 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 UCKL1Q9NWZ5 548 aa23.99■■□□□ 1.43
PTPRA-208ENST00000455631 A0A1B0GVM2 712 aa23.98■■□□□ 1.43
PTPRA-208ENST00000455631 SLC7A4O43246 635 aa23.98■■□□□ 1.43
PTPRA-208ENST00000455631 SLC28A2O43868 658 aa23.98■■□□□ 1.43
PTPRA-208ENST00000455631 CSO75390 466 aaKnown RBP23.98■■□□□ 1.43
PTPRA-208ENST00000455631 VDRP11473 427 aa23.98■■□□□ 1.43
PTPRA-208ENST00000455631 DGKAP23743 735 aa23.98■■□□□ 1.43
PTPRA-208ENST00000455631 LSSP48449 732 aa23.98■■□□□ 1.43
PTPRA-208ENST00000455631 VAC14Q08AM6 782 aa23.98■■□□□ 1.43
PTPRA-208ENST00000455631 SETMARQ53H47 684 aaPredicted RBP23.98■■□□□ 1.43
PTPRA-208ENST00000455631 TRIM69Q86WT6 500 aa23.98■■□□□ 1.43
PTPRA-208ENST00000455631 SPAG5Q96R06 1193 aa23.98■■□□□ 1.43
PTPRA-208ENST00000455631 MYOCQ99972 504 aa23.98■■□□□ 1.43
PTPRA-208ENST00000455631 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.98■■□□□ 1.43
PTPRA-208ENST00000455631 POLR1BQ9H9Y6 1135 aa23.98■■□□□ 1.43
PTPRA-208ENST00000455631 THSD1Q9NS62 852 aa23.98■■□□□ 1.43
PTPRA-208ENST00000455631 PRAMEF26H0Y7S4 382 aa23.97■■□□□ 1.43
PTPRA-208ENST00000455631 STX10O60499 249 aa23.97■■□□□ 1.43
PTPRA-208ENST00000455631 TDRD6O60522 2096 aaKnown RBP23.97■■□□□ 1.43
PTPRA-208ENST00000455631 GABBR2O75899 941 aa23.97■■□□□ 1.43
PTPRA-208ENST00000455631 MYL1P05976 194 aa23.97■■□□□ 1.43
PTPRA-208ENST00000455631 YWHAEP62258 255 aaKnown RBP23.97■■□□□ 1.43
PTPRA-208ENST00000455631 PMF1Q6P1K2 205 aa23.97■■□□□ 1.43
PTPRA-208ENST00000455631 NAV2Q8IVL1 2488 aa23.97■■□□□ 1.43
PTPRA-208ENST00000455631 LGI2Q8N0V4 545 aa23.97■■□□□ 1.43
PTPRA-208ENST00000455631 CCDC47Q96A33 483 aaKnown RBP23.97■■□□□ 1.43
PTPRA-208ENST00000455631 FAM131CQ96AQ9 280 aa23.97■■□□□ 1.43
PTPRA-208ENST00000455631 VCPIP1Q96JH7 1222 aa23.97■■□□□ 1.43
PTPRA-208ENST00000455631 SERPINB11Q96P15 392 aa23.97■■□□□ 1.43
PTPRA-208ENST00000455631 TLR6Q9Y2C9 796 aa23.97■■□□□ 1.43
PTPRA-208ENST00000455631 THEGLP0DJG4 465 aa23.96■■□□□ 1.43
PTPRA-208ENST00000455631 CKMT1AP12532 417 aa23.96■■□□□ 1.43
PTPRA-208ENST00000455631 AGBL4Q5VU57 503 aa23.96■■□□□ 1.43
PTPRA-208ENST00000455631 DSG4Q86SJ6 1040 aa23.96■■□□□ 1.43
PTPRA-208ENST00000455631 DQX1Q8TE96 717 aaKnown RBP23.96■■□□□ 1.43
PTPRA-208ENST00000455631 OR8D1Q8WZ84 308 aa23.96■■□□□ 1.43
PTPRA-208ENST00000455631 DPH1Q9BZG8 443 aa23.96■■□□□ 1.43
PTPRA-208ENST00000455631 ASCL3Q9NQ33 180 aa23.96■■□□□ 1.43
PTPRA-208ENST00000455631 XPO7Q9UIA9 1087 aaKnown RBP23.96■■□□□ 1.43
PTPRA-208ENST00000455631 SARDHQ9UL12 918 aa23.96■■□□□ 1.43
PTPRA-208ENST00000455631 MYF5P13349 255 aa23.95■■□□□ 1.42
PTPRA-208ENST00000455631 CNTN1Q12860 1018 aa23.95■■□□□ 1.42
PTPRA-208ENST00000455631 CBWD6Q4V339 395 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms