RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 ULK2Q8IYT8 1036 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 TDHQ8IZJ6 230 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 PLD5Q8N7P1 536 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 PIP4K2CQ8TBX8 421 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 ATP2A3Q93084 1043 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 CFAP36Q96G28 342 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 CWH43Q9H720 699 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 ALG13Q9NP73 1137 aaKnown RBP13.63□□□□□ -0.23
LINC00343-203ENST00000454555 SIX4Q9UIU6 781 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 PTPRSQ13332 1948 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.62□□□□□ -0.23
LINC00343-203ENST00000454555 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.62□□□□□ -0.23
LINC00343-203ENST00000454555 CARNS1A5YM72 827 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 KCNN4O15554 427 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 TLL1O43897 1013 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 GCATO75600 419 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 ITGB3P05106 788 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 SETSIPP0DME0 302 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 MLNP12872 115 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 CLCN2P51788 898 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 BCAR1P56945 870 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 UPP1Q16831 310 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 C9orf57Q5W0N0 161 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 ZDHHC17Q8IUH5 632 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 EMC1Q8N766 993 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 RBM15BQ8NDT2 890 aaKnown RBP13.62□□□□□ -0.23
LINC00343-203ENST00000454555 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
LINC00343-203ENST00000454555 PPP2R3CQ969Q6 453 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 EBNA1BP2Q99848 306 aaKnown RBP13.62□□□□□ -0.23
LINC00343-203ENST00000454555 GOLGA2P5Q9HBQ8 144 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 ZDHHC7Q9NXF8 308 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 CPSF2Q9P2I0 782 aaKnown RBP13.62□□□□□ -0.23
LINC00343-203ENST00000454555 NXF1Q9UBU9 619 aaKnown RBP13.62□□□□□ -0.23
LINC00343-203ENST00000454555 PCDHA11Q9Y5I1 949 aa13.62□□□□□ -0.23
LINC00343-203ENST00000454555 M0QYV0 167 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 B4GALT3O60512 393 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 GLRA3O75311 464 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 SNUPNO95149 360 aaKnown RBP13.61□□□□□ -0.23
LINC00343-203ENST00000454555 ALDH2P05091 517 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 ENO1P06733 434 aaKnown RBP13.61□□□□□ -0.23
LINC00343-203ENST00000454555 PDGFRAP16234 1089 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 PAX3P23760 479 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 GRK2P25098 689 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 CLCNKBP51801 687 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 CACNA2D1P54289 1103 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 INCA1Q0VD86 236 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 HNRNPDQ14103 355 aaKnown RBP13.61□□□□□ -0.23
LINC00343-203ENST00000454555 INSCQ1MX18 579 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 DCLRE1AQ6PJP8 1040 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 LCLAT1Q6UWP7 414 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 CYP4V2Q6ZWL3 525 aaPredicted RBP13.61□□□□□ -0.23
LINC00343-203ENST00000454555 MARK2Q7KZI7 788 aaKnown RBP13.61□□□□□ -0.23
LINC00343-203ENST00000454555 TTC7BQ86TV6 843 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 PRPF39Q86UA1 669 aaKnown RBP13.61□□□□□ -0.23
LINC00343-203ENST00000454555 ALYREFQ86V81 257 aaKnown RBP13.61□□□□□ -0.23
LINC00343-203ENST00000454555 CAND1Q86VP6 1230 aaKnown RBP13.61□□□□□ -0.23
LINC00343-203ENST00000454555 FIBCD1Q8N539 461 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 LRRC52Q8N7C0 313 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 STKLD1Q8NE28 680 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 CDKL2Q92772 493 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 NAT9Q9BTE0 207 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 C12orf65Q9H3J6 166 aaKnown RBP13.61□□□□□ -0.23
LINC00343-203ENST00000454555 C10orf88Q9H8K7 445 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 KRT82Q9NSB4 513 aa13.61□□□□□ -0.23
LINC00343-203ENST00000454555 MRPL42Q9Y6G3 142 aaKnown RBP13.61□□□□□ -0.23
LINC00343-203ENST00000454555 PDCD11Q14690 1871 aaKnown RBP13.61□□□□□ -0.23
LINC00343-203ENST00000454555 FNDC1Q4ZHG4 1894 aaPredicted RBP13.61□□□□□ -0.23
LINC00343-203ENST00000454555 CASTOR2A6NHX0 329 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 SDR42E2A6NKP2 422 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 TMEM189-UBE2V1I3L0A0 370 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 GALTP07902 379 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 CCDC130P13994 396 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 PRDX6P30041 224 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 PNPLA4P41247 253 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 AQP5P55064 265 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 DYNC1I2Q13409 638 aaKnown RBP13.6□□□□□ -0.23
LINC00343-203ENST00000454555 C1orf146Q5VVC0 180 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 STEAP4Q687X5 459 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 SCARA3Q6AZY7 606 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 FAM109BQ6ICB4 259 aaPredicted RBP13.6□□□□□ -0.23
LINC00343-203ENST00000454555 RIPOR1Q6ZS17 1223 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 CDHR3Q6ZTQ4 885 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 NDUFAF2Q8N183 169 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 PIWIL2Q8TC59 973 aaKnown RBP13.6□□□□□ -0.23
LINC00343-203ENST00000454555 RXFP2Q8WXD0 754 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 OLFM3Q96PB7 478 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 GBP5Q96PP8 586 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 PEBP4Q96S96 227 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 DCDC2Q9UHG0 476 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 BARX2Q9UMQ3 279 aaPredicted RBP13.6□□□□□ -0.23
LINC00343-203ENST00000454555 A0A1W2PPC1 479 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 ENO4A6NNW6 628 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 GRXCR1A8MXD5 290 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 E5RJQ4 531 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 NRP1O14786 923 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 CCNT2O60583 730 aaKnown RBP13.6□□□□□ -0.23
LINC00343-203ENST00000454555 ALDH1A2O94788 518 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 KRT19P08727 400 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 LINC00271P0C7V0 271 aa13.6□□□□□ -0.23
LINC00343-203ENST00000454555 PIM1P11309 404 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms