RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 FZD5Q13467 585 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 DPYSQ14117 519 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 PDK2Q15119 407 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 FUT11Q495W5 492 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 ZFYVE27Q5T4F4 411 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 CWF19L1Q69YN2 538 aaKnown RBP13.39□□□□□ -0.27
VPS33A-202ENST00000451053 ANKS1BQ7Z6G8 1248 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 KIAA0907Q7Z7F0 614 aaPredicted RBP13.39□□□□□ -0.27
VPS33A-202ENST00000451053 CCDC117Q8IWD4 279 aaPredicted RBP13.39□□□□□ -0.27
VPS33A-202ENST00000451053 SUGP1Q8IWZ8 645 aaKnown RBP13.39□□□□□ -0.27
VPS33A-202ENST00000451053 CCDC105Q8IYK2 499 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.39□□□□□ -0.27
VPS33A-202ENST00000451053 RTL3Q8N8U3 475 aaKnown RBP13.39□□□□□ -0.27
VPS33A-202ENST00000451053 FLCNQ8NFG4 579 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 CSPG4P5Q96PW8 444 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 TLR10Q9BXR5 811 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 TMEM248Q9NWD8 314 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 DDX56Q9NY93 547 aaKnown RBP13.39□□□□□ -0.27
VPS33A-202ENST00000451053 INTS6Q9UL03 887 aaKnown RBP13.39□□□□□ -0.27
VPS33A-202ENST00000451053 PACSIN2Q9UNF0 486 aaPredicted RBP13.39□□□□□ -0.27
VPS33A-202ENST00000451053 TBC1D30Q9Y2I9 924 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 MRPS17Q9Y2R5 130 aaKnown RBP13.39□□□□□ -0.27
VPS33A-202ENST00000451053 PCDHA3Q9Y5H8 950 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 DOCK4Q8N1I0 1966 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 TECTAO75443 2155 aa13.39□□□□□ -0.27
VPS33A-202ENST00000451053 A0A0A0MRY4 1105 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 TBC1D3BA6NDS4 549 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 C3orf70A6NLC5 250 aaPredicted RBP13.38□□□□□ -0.27
VPS33A-202ENST00000451053 WASH4PA8MWX3 477 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 K7EQS6 105 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 FGF10O15520 208 aaPredicted RBP13.38□□□□□ -0.27
VPS33A-202ENST00000451053 DAPK3O43293 454 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 URI1O94763 535 aaPredicted RBP13.38□□□□□ -0.27
VPS33A-202ENST00000451053 RHOCP08134 193 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 CHRNB1P11230 501 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 ERCC2P18074 760 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 DRD1P21728 446 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 AMPD1P23109 780 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 KDELR1P24390 212 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 IL4RP24394 825 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 MZF1P28698 734 aaPredicted RBP13.38□□□□□ -0.27
VPS33A-202ENST00000451053 OR1E1P30953 314 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 MAPKAPK2P49137 400 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 ZNF135P52742 658 aaPredicted RBP13.38□□□□□ -0.27
VPS33A-202ENST00000451053 CCINQ13939 588 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 ODF2Q5BJF6 829 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 RNF219Q5W0B1 726 aaPredicted RBP13.38□□□□□ -0.27
VPS33A-202ENST00000451053 TMEM215Q68D42 235 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 SETD3Q86TU7 594 aaPredicted RBP13.38□□□□□ -0.27
VPS33A-202ENST00000451053 ADIPOR2Q86V24 386 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 KATNAL2Q8IYT4 538 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 APCDD1Q8J025 514 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 ZNF557Q8N988 423 aaPredicted RBP13.38□□□□□ -0.27
VPS33A-202ENST00000451053 PJA1Q8NG27 643 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 ALG3Q92685 438 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 EXOC4Q96A65 974 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 RNF25Q96BH1 459 aaPredicted RBP13.38□□□□□ -0.27
VPS33A-202ENST00000451053 PBKQ96KB5 322 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 CALN1Q9BXU9 219 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 CARD9Q9H257 536 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 CATSPERBQ9H7T0 1116 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 ETNK2Q9NVF9 386 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 KIAA1522Q9P206 1035 aaPredicted RBP13.38□□□□□ -0.27
VPS33A-202ENST00000451053 HCN2Q9UL51 889 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 MFHAS1Q9Y4C4 1052 aa13.38□□□□□ -0.27
VPS33A-202ENST00000451053 A0A0D9SEW6 157 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 FAM86C2PA6NEL3 165 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 KCNK3O14649 394 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 DCLK1O15075 740 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 PI15O43692 258 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 CHRM1P11229 460 aaPredicted RBP13.37□□□□□ -0.27
VPS33A-202ENST00000451053 CETN2P41208 172 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 PEX5P50542 639 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 SEC13P55735 322 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 RWDD2BP57060 319 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 PLEKHG6Q3KR16 790 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 PREPLQ4J6C6 727 aaPredicted RBP13.37□□□□□ -0.27
VPS33A-202ENST00000451053 ANKRD20A8PQ5CZ79 823 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 PITRM1Q5JRX3 1037 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 C6orf118Q5T5N4 469 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 EMC10Q5UCC4 262 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 MBLAC2Q68D91 279 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 MFSD7Q6UXD7 560 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 MAP7D3Q8IWC1 876 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 AHI1Q8N157 1196 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 NPWQ8N729 165 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 OR7D4Q8NG98 312 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 PCDH19Q8TAB3 1148 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 WFIKKN2Q8TEU8 576 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 SORCS1Q8WY21 1168 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 FAF2Q96CS3 445 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 ALG14Q96F25 216 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 OSBPL9Q96SU4 736 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 NELL2Q99435 816 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 ZNF670Q9BS34 389 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 FEM1AQ9BSK4 669 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 KLC2Q9H0B6 622 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 RETREG1Q9H6L5 497 aa13.37□□□□□ -0.27
VPS33A-202ENST00000451053 NOL6Q9H6R4 1146 aaKnown RBP13.37□□□□□ -0.27
VPS33A-202ENST00000451053 LMAN1LQ9HAT1 526 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms