RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TMPRSS6Q8IU80 811 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 MFN1Q8IWA4 741 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 LGI2Q8N0V4 545 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 HJURPQ8NCD3 748 aaPredicted RBP17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 ACRBPQ8NEB7 543 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 DDX50Q9BQ39 737 aaKnown RBP17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 TRIM62Q9BVG3 475 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 SELENOOQ9BVL4 669 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 TSGA10Q9BZW7 698 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 MRPL47Q9HD33 250 aaKnown RBP17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 CNOT8Q9UFF9 292 aaKnown RBP17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 ADGRG1Q9Y653 693 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 SCINQ9Y6U3 715 aa17.6■□□□□ 0.41
PRPF40A-204ENST00000450303 UQCRHLA0A096LP55 91 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 NDUFS2O75306 463 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 UQCRHP07919 91 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 SCNN1AP37088 669 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 GSCP56915 257 aaPredicted RBP17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 SLC6A3Q01959 620 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 ZNF33AQ06730 810 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 KIF5AQ12840 1032 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 PTP4A2Q12974 167 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 NNTQ13423 1086 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 TRIM61Q5EBN2 209 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 MS4A13Q5J8X5 152 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 EFHC1Q5JVL4 640 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 MPP7Q5T2T1 576 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 XYLT1Q86Y38 959 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 SYT12Q8IV01 421 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 SLC41A1Q8IVJ1 513 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 AHI1Q8N157 1196 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 SIPA1Q96FS4 1042 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 DESI2Q9BSY9 194 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 FAM204AQ9H8W3 233 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 FSCN3Q9NQT6 498 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 PARVAQ9NVD7 372 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 MYO1AQ9UBC5 1043 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 PLA2G4CQ9UP65 541 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 PAXBP1Q9Y5B6 917 aa17.59■□□□□ 0.41
PRPF40A-204ENST00000450303 TM4SF5O14894 197 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 IGLV3-25P01717 112 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 TNNT1P13805 278 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 POLR2EP19388 210 aaKnown RBP17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 TACR2P21452 398 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 NUMBP49757 651 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 COPAP53621 1224 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 LMAN2Q12907 356 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 E2F5Q15329 346 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 PTPRNQ16849 979 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 FSCBQ5H9T9 825 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 SPDYCQ5MJ68 293 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 DNAJC24Q6P3W2 148 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 OLFML1Q6UWY5 402 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 CHSY1Q86X52 802 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 RHOT2Q8IXI1 618 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 C3orf20Q8ND61 904 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 FIBINQ8TAL6 211 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 PRCCQ92733 491 aaPredicted RBP17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 RNF34Q969K3 372 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 LMLNQ96KR4 655 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 CALR3Q96L12 384 aaKnown RBP17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 HSPA12BQ96MM6 686 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 SLC2A13Q96QE2 648 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 IRX2Q9BZI1 471 aaPredicted RBP17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 THAP2Q9H0W7 228 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 TMEM245Q9H330 911 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 MTG2Q9H4K7 406 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 ITM2CQ9NQX7 267 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 ASNSD1Q9NWL6 643 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 DDIT4Q9NX09 232 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 PILRBQ9UKJ0 227 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 PPP2R2CQ9Y2T4 447 aa17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 MUC22E2RYF6 1773 aaPredicted RBP17.58■□□□□ 0.4
PRPF40A-204ENST00000450303 TYW5A2RUC4 315 aaKnown RBP17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 GOLGA8SH3BPF8 625 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 PJA2O43164 708 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 KRT86O43790 486 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 HSF2BPO75031 334 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 CFIP05156 583 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 GLI1P08151 1106 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 DESP17661 470 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 RRM1P23921 792 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 MAOBP27338 520 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 RNASE9P60153 205 aaKnown RBP17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 NME3Q13232 169 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 EIF4EBP2Q13542 120 aaPredicted RBP17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 FAM102AQ5T9C2 384 aaPredicted RBP17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 CCAR2Q8N163 923 aaKnown RBP17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 ATP6V0D2Q8N8Y2 350 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 MYRIPQ8NFW9 859 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 TOE1Q96GM8 510 aaKnown RBP17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 BTN2A3PQ96KV6 586 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 NUSAP1Q9BXS6 441 aaKnown RBP17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 PACSIN1Q9BY11 444 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 UVRAGQ9P2Y5 699 aa17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 INTS6Q9UL03 887 aaKnown RBP17.57■□□□□ 0.4
PRPF40A-204ENST00000450303 NCOR2Q9Y618 2525 aa17.56■□□□□ 0.4
PRPF40A-204ENST00000450303 KCNU1A8MYU2 1149 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms