RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 PPM1NQ8N819 430 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ABTB2Q8N961 1025 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 KCTD6Q8NC69 237 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 OR8K3Q8NH51 312 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ZNF507Q8TCN5 953 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PYDC1Q8WXC3 89 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 POMGNT1Q8WZA1 660 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ELMO1Q92556 727 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 NUDT16Q96DE0 195 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 TCEAL4Q96EI5 215 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SLC39A13Q96H72 371 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 MAGEB10Q96LZ2 347 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 SNX18Q96RF0 628 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 MIPEPQ99797 713 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SENP7Q9BQF6 1050 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 MMP27Q9H306 513 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 FN3KQ9H479 309 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 COPS7BQ9H9Q2 264 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 LIN7BQ9HAP6 207 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ZNF334Q9HCZ1 680 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 KRCC1Q9NPI7 259 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 CD93Q9NPY3 652 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ANAPC7Q9UJX3 599 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CDV3Q9UKY7 258 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 CDH9Q9ULB4 789 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 RAB23Q9ULC3 237 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 KCNH4Q9UQ05 1017 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 EIF3LQ9Y262 564 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 SIK3Q9Y2K2 1263 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 GSTK1Q9Y2Q3 226 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 MAGED1Q9Y5V3 778 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 CACNA1FO60840 1977 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 MN1Q10571 1320 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 SYNJ2BP-COX16A0A087WUM0 186 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 C2orf81A6NN90 581 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ZNF99A8MXY4 864 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 MCIDASD6RGH6 385 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 EIF3FO00303 357 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 ALOX15BO15296 676 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 MPZL2O60487 215 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 GMDSO60547 372 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CCNT2O60583 730 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 GDF11O95390 407 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 APOC1P02654 83 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 GZMAP12544 262 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 S100A2P29034 98 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 YWHABP31946 246 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 AQP4P55087 323 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RHBDL3P58872 404 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RPP38P78345 283 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 MPP1Q00013 466 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TTLL12Q14166 644 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 PTPAQ15257 358 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ANO4Q32M45 955 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PLEKHG6Q3KR16 790 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TIGD2Q4W5G0 525 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 FBXO31Q5XUX0 539 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 LRRC66Q68CR7 880 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SMYD5Q6GMV2 418 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 NEPROQ6NW34 567 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 C11orf88Q6PI97 169 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ZNF773Q6PK81 442 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 DHRS4L2Q6PKH6 230 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RHOUQ7L0Q8 258 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 BEND5Q7L4P6 421 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 FASTKD5Q7L8L6 764 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 THAP5Q7Z6K1 395 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 AMIGO2Q86SJ2 522 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SAPCD2Q86UD0 394 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ZNF410Q86VK4 478 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 P2RY8Q86VZ1 359 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 BPHLQ86WA6 291 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 WDR49Q8IV35 697 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SLITRK4Q8IW52 837 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 KATNAL2Q8IYT4 538 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CLYBLQ8N0X4 340 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 DAGLBQ8NCG7 672 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 OR10T2Q8NGX3 314 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PLBD2Q8NHP8 589 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 C9orf43Q8TAL5 461 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 HEXDCQ8WVB3 486 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 MYLPFQ96A32 169 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TADA1Q96BN2 335 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TXNDC15Q96J42 360 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ZNF578Q96N58 590 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 SERPINB11Q96P15 392 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PFDN5Q99471 154 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 HINFPQ9BQA5 517 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 REEP2Q9BRK0 252 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 MAGEB5Q9BZ81 275 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 GANQ9H2C0 597 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ADAMTS10Q9H324 1103 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 GAREM1Q9H706 876 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 KAT8Q9H7Z6 458 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 WDR41Q9HAD4 459 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PAK6Q9NQU5 681 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 SRP68Q9UHB9 627 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 PLEKHA6Q9Y2H5 1048 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 UTYO14607 1347 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SALL1Q9NSC2 1324 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms