RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 HIDE1A8MVS5 230 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 MAFKO60675 156 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 BANF1O75531 89 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 CNTN5O94779 1100 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 GLUD1P00367 558 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 TSHRP16473 764 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 TACR2P21452 398 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 DNAJB1P25685 340 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 IRAK1P51617 712 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 GYS2P54840 703 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 SARNPP82979 210 aaKnown RBP14.61□□□□□ -0.07
USP39-207ENST00000450066 STAT4Q14765 748 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 CCDC38Q502W7 563 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 ALFQ53S48 1182 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 ANKMY2Q8IV38 441 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 ATP11CQ8NB49 1132 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 FBXO36Q8NEA4 188 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 FAM76AQ8TAV0 307 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 WDR83Q9BRX9 315 aaKnown RBP14.61□□□□□ -0.07
USP39-207ENST00000450066 C17orf80Q9BSJ5 609 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 KLF16Q9BXK1 252 aaPredicted RBP14.61□□□□□ -0.07
USP39-207ENST00000450066 RETREG1Q9H6L5 497 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 NOL6Q9H6R4 1146 aaKnown RBP14.61□□□□□ -0.07
USP39-207ENST00000450066 XAB2Q9HCS7 855 aaKnown RBP14.61□□□□□ -0.07
USP39-207ENST00000450066 ZNF212Q9UDV6 495 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 ADAM21Q9UKJ8 722 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 TEX264Q9Y6I9 313 aa14.61□□□□□ -0.07
USP39-207ENST00000450066 GOLGA6L7A0A1B0GV03 622 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 F5H5T6 163 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 MATN3O15232 486 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 AVILO75366 819 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 STC2O76061 302 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 C8AP07357 584 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 PSMB4P28070 264 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 MAGEA3P43357 314 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 LMAN1P49257 510 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 IFI35P80217 286 aaPredicted RBP14.6□□□□□ -0.07
USP39-207ENST00000450066 ZBTB17Q13105 803 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 FAM133BQ5BKY9 247 aaKnown RBP14.6□□□□□ -0.07
USP39-207ENST00000450066 PLPP4Q5VZY2 271 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 ITPRIPL1Q6GPH6 555 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 TIGD7Q6NT04 549 aaPredicted RBP14.6□□□□□ -0.07
USP39-207ENST00000450066 ARHGAP36Q6ZRI8 547 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 TFAP2DQ7Z6R9 452 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 EPS8L3Q8TE67 593 aaKnown RBP14.6□□□□□ -0.07
USP39-207ENST00000450066 LRRC39Q96DD0 335 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 TEKT5Q96M29 485 aa14.6□□□□□ -0.07
USP39-207ENST00000450066 DOCK4Q8N1I0 1966 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 TLDC2A0PJX2 215 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 ZBTB24O43167 697 aaPredicted RBP14.59□□□□□ -0.07
USP39-207ENST00000450066 JCHAINP01591 159 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 RB1P06400 928 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 IVLP07476 585 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 MLNP12872 115 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 CCNB1P14635 433 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 PHBP35232 272 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 PAPOLAP51003 745 aaKnown RBP14.59□□□□□ -0.07
USP39-207ENST00000450066 GPX6P59796 221 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 DNAJC21Q5F1R6 531 aaKnown RBP14.59□□□□□ -0.07
USP39-207ENST00000450066 ZNF534Q76KX8 674 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 ELMOD1Q8N336 334 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 SH2D3CQ8N5H7 860 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 PDCD7Q8N8D1 485 aaKnown RBP14.59□□□□□ -0.07
USP39-207ENST00000450066 FATE1Q969F0 183 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 AGAP3Q96P47 875 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 GBA3Q9H227 469 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 VPS37BQ9H9H4 285 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 GKN1Q9NS71 199 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 BCCIPQ9P287 314 aaKnown RBP eCLIP14.59□□□□□ -0.07
USP39-207ENST00000450066 RGS16O15492 202 aaPredicted RBP14.59□□□□□ -0.07
USP39-207ENST00000450066 OLFM2O95897 454 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 C1RP00736 705 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 KLKB1P03952 638 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 CORO1AP31146 461 aaKnown RBP14.59□□□□□ -0.07
USP39-207ENST00000450066 CD68P34810 354 aaPredicted RBP14.59□□□□□ -0.07
USP39-207ENST00000450066 ELK3P41970 407 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 MAPKAPK2P49137 400 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 CLCN4P51793 760 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 MTM1Q13496 603 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 LONRF1Q17RB8 773 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 RTL10Q7L3V2 364 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 DENND1CQ8IV53 801 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 PALM2Q8IXS6 379 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 LGI2Q8N0V4 545 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 IL12RB2Q99665 862 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 LRRC3Q9BY71 257 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 RSPH14Q9UHP6 348 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 IPO11Q9UI26 975 aaKnown RBP14.59□□□□□ -0.07
USP39-207ENST00000450066 ANAPC1Q9H1A4 1944 aa14.59□□□□□ -0.07
USP39-207ENST00000450066 ARHGAP42A6NI28 874 aa14.58□□□□□ -0.08
USP39-207ENST00000450066 SMIM23A6NLE4 172 aa14.58□□□□□ -0.08
USP39-207ENST00000450066 ERI2A8K979 691 aaKnown RBP14.58□□□□□ -0.08
USP39-207ENST00000450066 LPXNO60711 386 aa14.58□□□□□ -0.08
USP39-207ENST00000450066 MYOGP15173 224 aa14.58□□□□□ -0.08
USP39-207ENST00000450066 SLC6A4P31645 630 aa14.58□□□□□ -0.08
USP39-207ENST00000450066 SLCO1A2P46721 670 aa14.58□□□□□ -0.08
USP39-207ENST00000450066 EMC10Q5UCC4 262 aa14.58□□□□□ -0.08
USP39-207ENST00000450066 C3orf62Q6ZUJ4 267 aa14.58□□□□□ -0.08
USP39-207ENST00000450066 GAREM2Q75VX8 874 aa14.58□□□□□ -0.08
USP39-207ENST00000450066 TMC8Q8IU68 726 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms