RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TMEM121Q9BTD3 319 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 USP29Q9HBJ7 922 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 MARK1Q9P0L2 795 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 EYSQ5T1H1 3165 aa19.77■□□□□ 0.76
RPS28-202ENST00000449223 ILVBLA1L0T0 632 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 TRDMT1O14717 391 aaKnown RBP19.76■□□□□ 0.75
RPS28-202ENST00000449223 SCAMP3O14828 347 aaKnown RBP19.76■□□□□ 0.75
RPS28-202ENST00000449223 MAP3K6O95382 1288 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 PENKP01210 267 aaPredicted RBP19.76■□□□□ 0.75
RPS28-202ENST00000449223 LAMP2P13473 410 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 ERCC6LQ2NKX8 1250 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 HABP4Q5JVS0 413 aaKnown RBP19.76■□□□□ 0.75
RPS28-202ENST00000449223 C6orf118Q5T5N4 469 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 FYB2Q5VWT5 728 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 CIR1Q86X95 450 aaPredicted RBP19.76■□□□□ 0.75
RPS28-202ENST00000449223 BPIFB1Q8TDL5 484 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 P2RY11Q96G91 374 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 SLC39A8Q9C0K1 460 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 MAGEH1Q9H213 219 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 UBE2ZQ9H832 354 aaPredicted RBP19.76■□□□□ 0.75
RPS28-202ENST00000449223 ANKZF1Q9H8Y5 726 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 USP15Q9Y4E8 981 aaPredicted RBP19.76■□□□□ 0.75
RPS28-202ENST00000449223 H7C0C1 242 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 TSPAN3O60637 253 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 RAMP2O60895 175 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 HOXD9P28356 352 aaPredicted RBP19.76■□□□□ 0.75
RPS28-202ENST00000449223 VIPR2P41587 438 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 ATP5OP48047 213 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 FCHO2Q0JRZ9 810 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 PTK6Q13882 451 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 DARS2Q6PI48 645 aaKnown RBP19.76■□□□□ 0.75
RPS28-202ENST00000449223 EP400NLQ6ZTU2 488 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 Q7L0L9 218 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 ADGRG2Q8IZP9 1017 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 GPR161Q8N6U8 529 aaKnown RBP19.76■□□□□ 0.75
RPS28-202ENST00000449223 CCHCR1Q8TD31 782 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 CELF6Q96J87 481 aaKnown RBP19.76■□□□□ 0.75
RPS28-202ENST00000449223 CCDC114Q96M63 670 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 LGMNQ99538 433 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 PCDH9Q9HC56 1237 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 ZFP14Q9HCL3 533 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 EPS15L1Q9UBC2 864 aa19.76■□□□□ 0.75
RPS28-202ENST00000449223 DMGDHQ9UI17 866 aaKnown RBP19.76■□□□□ 0.75
RPS28-202ENST00000449223 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.75■□□□□ 0.75
RPS28-202ENST00000449223 HEPACAM2A8MVW5 462 aa19.75■□□□□ 0.75
RPS28-202ENST00000449223 RASA4BC9J798 803 aa19.75■□□□□ 0.75
RPS28-202ENST00000449223 MTSS1O43312 755 aa19.75■□□□□ 0.75
RPS28-202ENST00000449223 RASA4O43374 803 aa19.75■□□□□ 0.75
RPS28-202ENST00000449223 TBL1XO60907 577 aa19.75■□□□□ 0.75
RPS28-202ENST00000449223 LUC7L3O95232 432 aaKnown RBP19.75■□□□□ 0.75
RPS28-202ENST00000449223 CYBBP04839 570 aa19.75■□□□□ 0.75
RPS28-202ENST00000449223 CCNCP24863 283 aa19.75■□□□□ 0.75
RPS28-202ENST00000449223 DRG2P55039 364 aaKnown RBP19.75■□□□□ 0.75
RPS28-202ENST00000449223 ZNF177Q13360 481 aaPredicted RBP19.75■□□□□ 0.75
RPS28-202ENST00000449223 SMAD4Q13485 552 aaKnown RBP19.75■□□□□ 0.75
RPS28-202ENST00000449223 CXorf57Q6NSI4 855 aaKnown RBP19.75■□□□□ 0.75
RPS28-202ENST00000449223 IRF7Q92985 503 aa19.75■□□□□ 0.75
RPS28-202ENST00000449223 ELSPBP1Q96BH3 223 aa19.75■□□□□ 0.75
RPS28-202ENST00000449223 ERP44Q9BS26 406 aa19.75■□□□□ 0.75
RPS28-202ENST00000449223 RAB17Q9H0T7 212 aa19.75■□□□□ 0.75
RPS28-202ENST00000449223 SPHK2Q9NRA0 654 aa19.75■□□□□ 0.75
RPS28-202ENST00000449223 ARHGAP42A6NI28 874 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 MAFKO60675 156 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 HEXIM1O94992 359 aaKnown RBP19.74■□□□□ 0.75
RPS28-202ENST00000449223 VAV1P15498 845 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 RBL1P28749 1068 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 ETFBP38117 255 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 GDF10P55107 478 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 POLD3Q15054 466 aaPredicted RBP19.74■□□□□ 0.75
RPS28-202ENST00000449223 EML3Q32P44 896 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 HEATR6Q6AI08 1181 aaKnown RBP19.74■□□□□ 0.75
RPS28-202ENST00000449223 TANGO2Q6ICL3 276 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 OTOP3Q7RTS5 596 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 MFSD6LQ8IWD5 586 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 ATPAF2Q8N5M1 289 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 DEFB123Q8N688 67 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 ZNF557Q8N988 423 aaPredicted RBP19.74■□□□□ 0.75
RPS28-202ENST00000449223 CCDC89Q8N998 374 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 DDI1Q8WTU0 396 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 HTR3CQ8WXA8 447 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 RSAD2Q8WXG1 361 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 LINC00597Q9H2U6 94 aa19.74■□□□□ 0.75
RPS28-202ENST00000449223 SHROOM3Q8TF72 1996 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 C5orf60A6NFR6 353 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 SGK1O00141 431 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 TUBBP07437 444 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 RHOXF2BP0C7M4 288 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 FOSL2P15408 326 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 PAPOLAP51003 745 aaKnown RBP19.73■□□□□ 0.75
RPS28-202ENST00000449223 GNA12Q03113 381 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 SERINC3Q13530 473 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 P3H1Q32P28 736 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 DUPD1Q68J44 220 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 VITQ6UXI7 678 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 GSTA5Q7RTV2 222 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 FAM71DQ8N9W8 422 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 TTC16Q8NEE8 873 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 FIBINQ8TAL6 211 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 ARHGEF2Q92974 986 aaKnown RBP19.73■□□□□ 0.75
RPS28-202ENST00000449223 FERMT1Q9BQL6 677 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms