RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 A0A1W2PPC4 97 aa29.18■■■□□ 2.26
CBX4-202ENST00000448310 CCT8P50990 548 aa29.18■■■□□ 2.26
CBX4-202ENST00000448310 IRF2BP1Q8IU81 584 aa29.18■■■□□ 2.26
CBX4-202ENST00000448310 RNF34Q969K3 372 aa29.18■■■□□ 2.26
CBX4-202ENST00000448310 FAM81BQ96LP2 452 aa29.18■■■□□ 2.26
CBX4-202ENST00000448310 LRRC72A6NJI9 287 aa29.17■■■□□ 2.26
CBX4-202ENST00000448310 ABCB4P21439 1286 aa29.17■■■□□ 2.26
CBX4-202ENST00000448310 PON1P27169 355 aa29.17■■■□□ 2.26
CBX4-202ENST00000448310 RACK1P63244 317 aaKnown RBP29.17■■■□□ 2.26
CBX4-202ENST00000448310 CENPCQ03188 943 aa29.17■■■□□ 2.26
CBX4-202ENST00000448310 SFSWAPQ12872 951 aaKnown RBP29.17■■■□□ 2.26
CBX4-202ENST00000448310 KCNJ12Q14500 433 aa29.17■■■□□ 2.26
CBX4-202ENST00000448310 EXOC3L4Q17RC7 722 aa29.17■■■□□ 2.26
CBX4-202ENST00000448310 PRAMEF14Q5SWL7 426 aa29.17■■■□□ 2.26
CBX4-202ENST00000448310 FAM183BPQ6ZVS7 135 aa29.17■■■□□ 2.26
CBX4-202ENST00000448310 C1orf131Q8NDD1 294 aaKnown RBP29.17■■■□□ 2.26
CBX4-202ENST00000448310 OR2T34Q8NGX1 318 aa29.17■■■□□ 2.26
CBX4-202ENST00000448310 ACE2Q9BYF1 805 aaPredicted RBP29.17■■■□□ 2.26
CBX4-202ENST00000448310 ADAMTS1Q9UHI8 967 aa29.17■■■□□ 2.26
CBX4-202ENST00000448310 FZD4Q9ULV1 537 aa29.17■■■□□ 2.26
CBX4-202ENST00000448310 DOCK9Q9BZ29 2069 aa29.16■■■□□ 2.26
CBX4-202ENST00000448310 WNT1P04628 370 aa29.16■■■□□ 2.26
CBX4-202ENST00000448310 CCR1P32246 355 aa29.16■■■□□ 2.26
CBX4-202ENST00000448310 GGCXP38435 758 aa29.16■■■□□ 2.26
CBX4-202ENST00000448310 IRAK1P51617 712 aa29.16■■■□□ 2.26
CBX4-202ENST00000448310 C21orf59P57076 290 aa29.16■■■□□ 2.26
CBX4-202ENST00000448310 OR6B2Q6IFH4 312 aa29.16■■■□□ 2.26
CBX4-202ENST00000448310 CXorf57Q6NSI4 855 aaKnown RBP29.16■■■□□ 2.26
CBX4-202ENST00000448310 FBXL22Q6P050 247 aa29.16■■■□□ 2.26
CBX4-202ENST00000448310 PROSER1Q86XN7 944 aa29.16■■■□□ 2.26
CBX4-202ENST00000448310 MARCH9Q86YJ5 346 aa29.16■■■□□ 2.26
CBX4-202ENST00000448310 PCDHGC3Q9UN70 934 aa29.16■■■□□ 2.26
CBX4-202ENST00000448310 CACNA1GO43497 2377 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 A0A1B0GVM2 712 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 TCAF2A6NFQ2 919 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 WNT9AO14904 365 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 VILLO15195 856 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 HSF2BPO75031 334 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 IL1BP01584 269 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 ERBB2P04626 1255 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 GLI1P08151 1106 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 PNMA6AP0CW24 399 aaPredicted RBP29.15■■■□□ 2.26
CBX4-202ENST00000448310 SLC2A3P11169 496 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 MTIF2P46199 727 aaKnown RBP29.15■■■□□ 2.26
CBX4-202ENST00000448310 METAP1P53582 386 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 SLC12A1Q13621 1099 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 EFHC1Q5JVL4 640 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 RABGAP1LQ5R372 815 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 SND1Q7KZF4 910 aaKnown RBP eCLIP29.15■■■□□ 2.26
CBX4-202ENST00000448310 OR14C36Q8NHC7 312 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 RPRD1AQ96P16 312 aaPredicted RBP29.15■■■□□ 2.26
CBX4-202ENST00000448310 SIX2Q9NPC8 291 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 ASNSD1Q9NWL6 643 aa29.15■■■□□ 2.26
CBX4-202ENST00000448310 PLK4O00444 970 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 PCDHGA12O60330 932 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 ADH1BP00325 375 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 GOT1P17174 413 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 C5AR1P21730 350 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 NNMTP40261 264 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 GRK6P43250 576 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 ADPRHP54922 357 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 NME3Q13232 169 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 ELAVL3Q14576 367 aaKnown RBP29.14■■■□□ 2.26
CBX4-202ENST00000448310 CCDC157Q569K6 752 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 TTC39BQ5VTQ0 682 aaPredicted RBP29.14■■■□□ 2.26
CBX4-202ENST00000448310 OLFML1Q6UWY5 402 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 C11orf57Q6ZUT1 292 aaPredicted RBP29.14■■■□□ 2.26
CBX4-202ENST00000448310 OR52K2Q8NGK3 314 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 PLCB1Q9NQ66 1216 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 AASDHPPTQ9NRN7 309 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 VANGL2Q9ULK5 521 aa29.14■■■□□ 2.26
CBX4-202ENST00000448310 GTPBP10A4D1E9 387 aaKnown RBP29.13■■■□□ 2.25
CBX4-202ENST00000448310 DKK1O94907 266 aa29.13■■■□□ 2.25
CBX4-202ENST00000448310 PLK1P53350 603 aa29.13■■■□□ 2.25
CBX4-202ENST00000448310 PTK2Q05397 1052 aa29.13■■■□□ 2.25
CBX4-202ENST00000448310 AUHQ13825 339 aaKnown RBP29.13■■■□□ 2.25
CBX4-202ENST00000448310 PTPN20Q4JDL3 420 aa29.13■■■□□ 2.25
CBX4-202ENST00000448310 GATAD2AQ86YP4 633 aa29.13■■■□□ 2.25
CBX4-202ENST00000448310 FRS2Q8WU20 508 aa29.13■■■□□ 2.25
CBX4-202ENST00000448310 DNAJC12Q9UKB3 198 aa29.13■■■□□ 2.25
CBX4-202ENST00000448310 HS3ST4Q9Y661 456 aa29.13■■■□□ 2.25
CBX4-202ENST00000448310 ACACAQ13085 2346 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 A0A1B0GTQ1 180 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 C10orf142B7Z368 130 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 TNFSF14O43557 240 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 DRD3P35462 400 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 UBE2HP62256 183 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 PPP2CBP62714 309 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 PPP2CAP67775 309 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 SULT2A1Q06520 285 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP29.12■■■□□ 2.25
CBX4-202ENST00000448310 TMPRSS7Q7RTY8 843 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 C14orf80Q86SX3 495 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 SLC47A2Q86VL8 602 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 MDM1Q8TC05 714 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 ALG14Q96F25 216 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 NOX5Q96PH1 765 aa29.12■■■□□ 2.25
CBX4-202ENST00000448310 APC2O95996 2303 aa29.11■■■□□ 2.25
CBX4-202ENST00000448310 FOXN3O00409 490 aaPredicted RBP29.11■■■□□ 2.25
CBX4-202ENST00000448310 DAB1O75553 588 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms