RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ANO4Q32M45 955 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 LY6G5CQ5SRR4 150 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 DARS2Q6PI48 645 aaKnown RBP20.04■□□□□ 0.8
SGCE-207ENST00000447873 SETD3Q86TU7 594 aaPredicted RBP20.04■□□□□ 0.8
SGCE-207ENST00000447873 TMEM25Q86YD3 366 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 YAF2Q8IY57 180 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 CCNYQ8ND76 341 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 ATL2Q8NHH9 583 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 CCDC26Q8TAB7 109 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 FGF14Q92915 247 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 BBS2Q9BXC9 721 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 SLC39A8Q9C0K1 460 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 PLK2Q9NYY3 685 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 PCYOX1Q9UHG3 505 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 AMACRQ9UHK6 382 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 FEZ2Q9UHY8 353 aaPredicted RBP20.04■□□□□ 0.8
SGCE-207ENST00000447873 DRG1Q9Y295 367 aaKnown RBP20.04■□□□□ 0.8
SGCE-207ENST00000447873 EFCAB8A8MWE9 144 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 ECI2O75521 394 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 ITGAVP06756 1048 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 PSMC3P17980 439 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 HOXD9P28356 352 aaPredicted RBP20.03■□□□□ 0.8
SGCE-207ENST00000447873 LMNB2Q03252 620 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 FCHO2Q0JRZ9 810 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 POLD3Q15054 466 aaPredicted RBP20.03■□□□□ 0.8
SGCE-207ENST00000447873 OASLQ15646 514 aaKnown RBP20.03■□□□□ 0.8
SGCE-207ENST00000447873 EML3Q32P44 896 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 FYB2Q5VWT5 728 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 AFMIDQ63HM1 303 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 TRIM68Q6AZZ1 485 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 B4GALNT4Q76KP1 1039 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 CDKL3Q8IVW4 592 aaPredicted RBP20.03■□□□□ 0.8
SGCE-207ENST00000447873 MFN1Q8IWA4 741 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 ARHGAP12Q8IWW6 846 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 GRK7Q8WTQ7 553 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 TFB1MQ8WVM0 346 aaKnown RBP20.03■□□□□ 0.8
SGCE-207ENST00000447873 P2RY11Q96G91 374 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 ZFYVE19Q96K21 471 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 LGMNQ99538 433 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 PLA2G2FQ9BZM2 168 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 NOL6Q9H6R4 1146 aaKnown RBP20.03■□□□□ 0.8
SGCE-207ENST00000447873 TBC1D30Q9Y2I9 924 aa20.03■□□□□ 0.8
SGCE-207ENST00000447873 SHROOM3Q8TF72 1996 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 KIF26AQ9ULI4 1882 aaPredicted RBP20.02■□□□□ 0.8
SGCE-207ENST00000447873 HACD1B0YJ81 288 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 RASA4BC9J798 803 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 NEDD8-MDP1E9PL57 170 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 RASA4O43374 803 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 NFATC1O95644 943 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 RHOCP08134 193 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 GARSP41250 739 aaKnown RBP20.02■□□□□ 0.8
SGCE-207ENST00000447873 YBEYP58557 167 aaPredicted RBP20.02■□□□□ 0.8
SGCE-207ENST00000447873 DR1Q01658 176 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 PDGFRLQ15198 375 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 LEXMQ3ZCV2 418 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 PARP15Q460N3 678 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 TEX35Q5T0J7 233 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 C8orf74Q6P047 294 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 RHBDF2Q6PJF5 856 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 GSTA5Q7RTV2 222 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 MAATS1Q7Z4T9 603 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 ATPAF2Q8N5M1 289 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 LRRN4Q8WUT4 740 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 DEPDC1BQ8WUY9 529 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 ATP2A3Q93084 1043 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 ASIC4Q96FT7 647 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 FAM83CQ9BQN1 747 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 TMEM121Q9BTD3 319 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 BRD8Q9H0E9 1235 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 EBF3Q9H4W6 596 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 C10orf88Q9H8K7 445 aa20.02■□□□□ 0.8
SGCE-207ENST00000447873 ILVBLA1L0T0 632 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 ARHGAP42A6NI28 874 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 PENKP01210 267 aaPredicted RBP20.01■□□□□ 0.79
SGCE-207ENST00000447873 TYRP14679 529 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 PAPOLAP51003 745 aaKnown RBP20.01■□□□□ 0.79
SGCE-207ENST00000447873 TUBB4BP68371 445 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 GNA12Q03113 381 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 AP1B1Q10567 949 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 GRM2Q14416 872 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 DHCR24Q15392 516 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 SLC45A4Q5BKX6 768 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 CCDC70Q6NSX1 233 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 ZNF354CQ86Y25 554 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 RSAD2Q8WXG1 361 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 HDAC11Q96DB2 347 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 QKIQ96PU8 341 aaKnown RBP eCLIP20.01■□□□□ 0.792e-6■■■■□ 23.3
SGCE-207ENST00000447873 PHF7Q9BWX1 381 aaPredicted RBP20.01■□□□□ 0.79
SGCE-207ENST00000447873 MAGEH1Q9H213 219 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 MARK1Q9P0L2 795 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 NUMBLQ9Y6R0 609 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 NYNRINQ9P2P1 1898 aaKnown RBP20.01■□□□□ 0.79
SGCE-207ENST00000447873 CHD5Q8TDI0 1954 aa20.01■□□□□ 0.79
SGCE-207ENST00000447873 BCLAF3A2AJT9 711 aaKnown RBP20■□□□□ 0.79
SGCE-207ENST00000447873 SGK1O00141 431 aa20■□□□□ 0.79
SGCE-207ENST00000447873 ECEL1O95672 775 aa20■□□□□ 0.79
SGCE-207ENST00000447873 GAS8O95995 478 aa20■□□□□ 0.79
SGCE-207ENST00000447873 ADH1CP00326 375 aa20■□□□□ 0.79
SGCE-207ENST00000447873 CYP17A1P05093 508 aa20■□□□□ 0.79
SGCE-207ENST00000447873 MRPS25P82663 173 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms