RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 SERPINB6P35237 376 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 ETFBP38117 255 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 NDST2P52849 883 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 YBEYP58557 167 aaPredicted RBP16.2■□□□□ 0.18
USP40-206ENST00000443711 PAFAH1B3Q15102 231 aaKnown RBP16.2■□□□□ 0.18
USP40-206ENST00000443711 LLGL1Q15334 1064 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 FSCBQ5H9T9 825 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 RNF219Q5W0B1 726 aaPredicted RBP16.2■□□□□ 0.18
USP40-206ENST00000443711 PAPD7Q5XG87 772 aaKnown RBP16.2■□□□□ 0.18
USP40-206ENST00000443711 SLC9A4Q6AI14 798 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 CXorf57Q6NSI4 855 aaKnown RBP16.2■□□□□ 0.18
USP40-206ENST00000443711 AADACL2Q6P093 401 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 C1orf228Q6PIY5 440 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 NUDT18Q6ZVK8 323 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 BBS12Q6ZW61 710 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 ANKS1BQ7Z6G8 1248 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 C12orf40Q86WS4 652 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 WFDC5Q8TCV5 224 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 UHRF1Q96T88 793 aaPredicted RBP16.2■□□□□ 0.18
USP40-206ENST00000443711 HEMGNQ9BXL5 484 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 MAGEH1Q9H213 219 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 NDFIP2Q9NV92 336 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 FBXL21Q9UKT6 434 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 CHD5Q8TDI0 1954 aa16.2■□□□□ 0.18
USP40-206ENST00000443711 KIAA1549LQ6ZVL6 1849 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 F5P12259 2224 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 COL4A3Q01955 1670 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 CES2O00748 559 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 MAN2B1O00754 1011 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 CEP104O60308 925 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 RAMP2O60895 175 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 TJP3O95049 919 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 PABPC1P11940 636 aaKnown RBP16.19■□□□□ 0.18
USP40-206ENST00000443711 CXCR5P32302 372 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 GALK1P51570 392 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 PLK1P53350 603 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 DYNLT1P63172 113 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 GNA12Q03113 381 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 LMAN2Q12907 356 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 DMC1Q14565 340 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 POLD3Q15054 466 aaPredicted RBP16.19■□□□□ 0.18
USP40-206ENST00000443711 MLF2Q15773 248 aaPredicted RBP16.19■□□□□ 0.18
USP40-206ENST00000443711 NCBP2-AS2Q69YL0 99 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 ASTLQ6HA08 431 aaPredicted RBP16.19■□□□□ 0.18
USP40-206ENST00000443711 KIAA0907Q7Z7F0 614 aaPredicted RBP16.19■□□□□ 0.18
USP40-206ENST00000443711 SUGP1Q8IWZ8 645 aaKnown RBP16.19■□□□□ 0.18
USP40-206ENST00000443711 PLD5Q8N7P1 536 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.19■□□□□ 0.18
USP40-206ENST00000443711 WFIKKN2Q8TEU8 576 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 LMLNQ96KR4 655 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 OSBPL9Q96SU4 736 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 P2RY13Q9BPV8 354 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 KLC2Q9H0B6 622 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 MUC3BQ9H195 1237 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 ABCB8Q9NUT2 735 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 MUTYHQ9UIF7 546 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 GGA2Q9UJY4 613 aa16.19■□□□□ 0.18
USP40-206ENST00000443711 APODP05090 189 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 TGM2P21980 687 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 HLA-FP30511 346 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 CD70P32970 193 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 CSKP41240 450 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 GRIA2P42262 883 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 PRKCQQ04759 706 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 KDSRQ06136 332 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 PARP15Q460N3 678 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 IER5LQ5T953 404 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 CCDC181Q5TID7 509 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 AFMIDQ63HM1 303 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 TPRG1Q6ZUI0 275 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 OR52K2Q8NGK3 314 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 CHFRQ96EP1 664 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 SHDQ96IW2 340 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 CELF6Q96J87 481 aaKnown RBP16.18■□□□□ 0.18
USP40-206ENST00000443711 FEM1AQ9BSK4 669 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 NOL6Q9H6R4 1146 aaKnown RBP16.18■□□□□ 0.18
USP40-206ENST00000443711 CA14Q9ULX7 337 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 MFHAS1Q9Y4C4 1052 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 RAD54BQ9Y620 910 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 SAR1BQ9Y6B6 198 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 NCOR1O75376 2440 aa16.18■□□□□ 0.18
USP40-206ENST00000443711 ARHGAP42A6NI28 874 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 ESPNB1AK53 854 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 RASA4BC9J798 803 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 TRIM24O15164 1050 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 RASA4O43374 803 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 KAT7O95251 611 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 MZF1P28698 734 aaPredicted RBP16.17■□□□□ 0.18
USP40-206ENST00000443711 NR2C2P49116 596 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 ZXDAP98168 799 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 ADCY2Q08462 1091 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 PLEKHG6Q3KR16 790 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 NAIF1Q69YI7 327 aaPredicted RBP16.17■□□□□ 0.18
USP40-206ENST00000443711 TXNDC11Q6PKC3 985 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 BZW1Q7L1Q6 419 aaKnown RBP16.17■□□□□ 0.18
USP40-206ENST00000443711 SLC13A5Q86YT5 568 aaPredicted RBP16.17■□□□□ 0.18
USP40-206ENST00000443711 ARHGAP12Q8IWW6 846 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 AHI1Q8N157 1196 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 PHTF2Q8N3S3 785 aa16.17■□□□□ 0.18
USP40-206ENST00000443711 NPWQ8N729 165 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms