RNA–Protein interactions for RNA: ENST00000443289.5

ATG4C-205, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 2

Gene ATG4C, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-205ENST00000443289 NT5C3BQ969T7 300 aa16.81■□□□□ 0.28
ATG4C-205ENST00000443289 PGAP3Q96FM1 320 aaPredicted RBP16.81■□□□□ 0.28
ATG4C-205ENST00000443289 MRGPRX3Q96LB0 322 aa16.81■□□□□ 0.28
ATG4C-205ENST00000443289 RPRD1AQ96P16 312 aaPredicted RBP16.81■□□□□ 0.28
ATG4C-205ENST00000443289 PCDHB18PQ96TA0 734 aa16.81■□□□□ 0.28
ATG4C-205ENST00000443289 NPY6RQ99463 290 aa16.81■□□□□ 0.28
ATG4C-205ENST00000443289 WDCPQ9H6R7 721 aa16.81■□□□□ 0.28
ATG4C-205ENST00000443289 MYO6Q9UM54 1294 aa16.81■□□□□ 0.28
ATG4C-205ENST00000443289 SCML1Q9UN30 329 aa16.81■□□□□ 0.28
ATG4C-205ENST00000443289 PAXBP1Q9Y5B6 917 aa16.81■□□□□ 0.28
ATG4C-205ENST00000443289 LAMA1P25391 3075 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 A0A1W2PQJ5 194 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 TARSL2A2RTX5 802 aaKnown RBP16.8■□□□□ 0.28
ATG4C-205ENST00000443289 CSRP1P21291 193 aaKnown RBP16.8■□□□□ 0.28
ATG4C-205ENST00000443289 MAOBP27338 520 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 NNMTP40261 264 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 PI4KAP42356 2102 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 CXCR3P49682 368 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 NOVA1P51513 510 aaKnown RBP16.8■□□□□ 0.28
ATG4C-205ENST00000443289 ZNF75DP51815 510 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 PLK1P53350 603 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 NOMO3P69849 1222 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 SULT2A1Q06520 285 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 SFSWAPQ12872 951 aaKnown RBP16.8■□□□□ 0.28
ATG4C-205ENST00000443289 TTC31Q49AM3 519 aaPredicted RBP16.8■□□□□ 0.28
ATG4C-205ENST00000443289 ACBD5Q5T8D3 534 aaPredicted RBP16.8■□□□□ 0.28
ATG4C-205ENST00000443289 FAM102AQ5T9C2 384 aaPredicted RBP16.8■□□□□ 0.28
ATG4C-205ENST00000443289 N4BP2L1Q5TBK1 243 aaPredicted RBP16.8■□□□□ 0.28
ATG4C-205ENST00000443289 DCAF12L1Q5VU92 463 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 PSAPL1Q6NUJ1 521 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 FAM124AQ86V42 546 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 APCDD1Q8J025 514 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 SLC30A5Q8TAD4 765 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 AGPAT1Q99943 283 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 GTPBP2Q9BX10 602 aaKnown RBP16.8■□□□□ 0.28
ATG4C-205ENST00000443289 EDEM3Q9BZQ6 932 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 RSPH9Q9H1X1 276 aaPredicted RBP16.8■□□□□ 0.28
ATG4C-205ENST00000443289 HAUS4Q9H6D7 363 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 PIGVQ9NUD9 493 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 CAPN11Q9UMQ6 739 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 LUC7L2Q9Y383 392 aaKnown RBP16.8■□□□□ 0.28
ATG4C-205ENST00000443289 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.8■□□□□ 0.285e-7■■■■□ 25.2
ATG4C-205ENST00000443289 HS3ST4Q9Y661 456 aa16.8■□□□□ 0.28
ATG4C-205ENST00000443289 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.79■□□□□ 0.28
ATG4C-205ENST00000443289 EDDM13A0A1B0GTR0 161 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 A0A1B0GTW7 788 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 SIN3BO75182 1162 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 PAGE1O75459 146 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 CLDN11O75508 207 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 CCDC172P0C7W6 258 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 CEACAM1P13688 526 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 PDGFRAP16234 1089 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 CTSOP43234 321 aaPredicted RBP16.79■□□□□ 0.28
ATG4C-205ENST00000443289 SULT1E1P49888 294 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 ZBED6P86452 979 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 DEUP1Q05D60 604 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 ZNF177Q13360 481 aaPredicted RBP16.79■□□□□ 0.28
ATG4C-205ENST00000443289 SLC25A52Q3SY17 297 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 C9orf64Q5T6V5 341 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 SH3PXD2AQ5TCZ1 1133 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 PHLDB2Q86SQ0 1253 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 CIR1Q86X95 450 aaPredicted RBP16.79■□□□□ 0.28
ATG4C-205ENST00000443289 HDDC3Q8N4P3 179 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 IGSF8Q969P0 613 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 ZDHHC5Q9C0B5 715 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 BTBD1Q9H0C5 482 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 TKTL2Q9H0I9 626 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 MIR1-1HGQ9H1L0 117 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 SGK2Q9HBY8 427 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 ARHGEF38Q9NXL2 777 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 SLCO3A1Q9UIG8 710 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 VANGL2Q9ULK5 521 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 NCKAP1Q9Y2A7 1128 aa16.79■□□□□ 0.28
ATG4C-205ENST00000443289 TTC34A8MYJ7 566 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 UPK3BL1B0FP48 263 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 UPK3BL2E5RIL1 263 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 OPHN1O60890 802 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 ADCY5O95622 1261 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 CYP1A1P04798 512 aaPredicted RBP16.78■□□□□ 0.28
ATG4C-205ENST00000443289 ACSL1P33121 698 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 KLHL30Q0D2K2 578 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 C5orf22Q49AR2 442 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 TDRD12Q587J7 1177 aaKnown RBP16.78■□□□□ 0.28
ATG4C-205ENST00000443289 OTUD1Q5VV17 481 aaPredicted RBP16.78■□□□□ 0.28
ATG4C-205ENST00000443289 USP30Q70CQ3 517 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 ARCQ7LC44 396 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
ATG4C-205ENST00000443289 MINDY1Q8N5J2 469 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 RPL10LQ96L21 214 aaKnown RBP16.78■□□□□ 0.28
ATG4C-205ENST00000443289 SIK2Q9H0K1 926 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 MTG2Q9H4K7 406 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 SLC32A1Q9H598 525 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 FSCN3Q9NQT6 498 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 AIPL1Q9NZN9 384 aa16.78■□□□□ 0.28
ATG4C-205ENST00000443289 MUC22E2RYF6 1773 aaPredicted RBP16.78■□□□□ 0.28
ATG4C-205ENST00000443289 TMCO5BA8MYB1 307 aa16.77■□□□□ 0.28
ATG4C-205ENST00000443289 GOLGA8SH3BPF8 625 aa16.77■□□□□ 0.28
ATG4C-205ENST00000443289 BCAT2O15382 392 aaPredicted RBP16.77■□□□□ 0.28
ATG4C-205ENST00000443289 SEMA4FO95754 770 aa16.77■□□□□ 0.28
ATG4C-205ENST00000443289 PLEKP08567 350 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms