RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 WDR59Q6PJI9 974 aa24.72■■□□□ 1.55
CPNE1-217ENST00000439669 STRADAQ7RTN6 431 aa24.72■■□□□ 1.55
CPNE1-217ENST00000439669 ZNF571Q7Z3V5 609 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-217ENST00000439669 ZNF683Q8IZ20 524 aa24.72■■□□□ 1.55
CPNE1-217ENST00000439669 KDM1BQ8NB78 822 aa24.72■■□□□ 1.55
CPNE1-217ENST00000439669 OR52K2Q8NGK3 314 aa24.72■■□□□ 1.55
CPNE1-217ENST00000439669 FAM172AQ8WUF8 416 aa24.72■■□□□ 1.55
CPNE1-217ENST00000439669 MCEEQ96PE7 176 aa24.72■■□□□ 1.55
CPNE1-217ENST00000439669 ITM2CQ9NQX7 267 aa24.72■■□□□ 1.55
CPNE1-217ENST00000439669 VPS28Q9UK41 221 aa24.72■■□□□ 1.55
CPNE1-217ENST00000439669 ATXN2Q99700 1313 aaKnown RBP24.71■■□□□ 1.55
CPNE1-217ENST00000439669 TTC34A8MYJ7 566 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 RHOCP08134 193 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 RRM1P23921 792 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 NNMTP40261 264 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 PBX1P40424 430 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 PRKCIP41743 596 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 STK19P49842 368 aaPredicted RBP24.71■■□□□ 1.55
CPNE1-217ENST00000439669 TPMTP51580 245 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 PLK1P53350 603 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 HNRNPA1L2Q32P51 320 aaKnown RBP24.71■■□□□ 1.55
CPNE1-217ENST00000439669 TFAP2DQ7Z6R9 452 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 NETO1Q8TDF5 533 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 TOE1Q96GM8 510 aaKnown RBP24.71■■□□□ 1.55
CPNE1-217ENST00000439669 MUC3BQ9H195 1237 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 TSPY26PQ9H489 355 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 MPP6Q9NZW5 540 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 SLCO3A1Q9UIG8 710 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 NUP205Q92621 2012 aa24.71■■□□□ 1.55
CPNE1-217ENST00000439669 TCRBV5S1A1TA0A578 114 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 GDF9O60383 454 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 SIN3BO75182 1162 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 SKILP12757 684 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 SDHBP21912 280 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 ITPKAP23677 461 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 OXTRP30559 389 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 ZNF33AQ06730 810 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 ZNF776Q68DI1 518 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-217ENST00000439669 DCUN1D2Q6PH85 259 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 FAM124AQ86V42 546 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 HSPA12BQ96MM6 686 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 FEM1AQ9BSK4 669 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 SLC25A13Q9UJS0 675 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 TBC1D30Q9Y2I9 924 aa24.7■■□□□ 1.54
CPNE1-217ENST00000439669 ITIH6Q6UXX5 1313 aa24.69■■□□□ 1.54
CPNE1-217ENST00000439669 EDDM13A0A1B0GTR0 161 aa24.69■■□□□ 1.54
CPNE1-217ENST00000439669 DRGXA6NNA5 263 aa24.69■■□□□ 1.54
CPNE1-217ENST00000439669 DNTTP04053 509 aa24.69■■□□□ 1.54
CPNE1-217ENST00000439669 ADRA1BP35368 520 aa24.69■■□□□ 1.54
CPNE1-217ENST00000439669 HDAC4P56524 1084 aa24.69■■□□□ 1.54
CPNE1-217ENST00000439669 RPS14P62263 151 aaKnown RBP24.69■■□□□ 1.54
CPNE1-217ENST00000439669 PUM1Q14671 1186 aaKnown RBP eCLIP24.69■■□□□ 1.54
CPNE1-217ENST00000439669 TDRD12Q587J7 1177 aaKnown RBP24.69■■□□□ 1.54
CPNE1-217ENST00000439669 SYT12Q8IV01 421 aa24.69■■□□□ 1.54
CPNE1-217ENST00000439669 CPLX3Q8WVH0 158 aa24.69■■□□□ 1.54
CPNE1-217ENST00000439669 CENPIQ92674 756 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-217ENST00000439669 ALG14Q96F25 216 aa24.69■■□□□ 1.54
CPNE1-217ENST00000439669 VCPIP1Q96JH7 1222 aa24.69■■□□□ 1.54
CPNE1-217ENST00000439669 GPR174Q9BXC1 333 aa24.69■■□□□ 1.54
CPNE1-217ENST00000439669 WSB2Q9NYS7 404 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-217ENST00000439669 IGLV3-10A0A075B6K4 115 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 A0A1W2PQJ5 194 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 PATE3B3GLJ2 98 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 KHNYNO15037 678 aaKnown RBP24.68■■□□□ 1.54
CPNE1-217ENST00000439669 CCP110O43303 1012 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 ATMINO43313 823 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-217ENST00000439669 RNASEH1O60930 286 aaKnown RBP24.68■■□□□ 1.54
CPNE1-217ENST00000439669 TPM3P06753 285 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 DESP17661 470 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 DPP6P42658 865 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 ZNF143P52747 638 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-217ENST00000439669 RPL7AP62424 266 aaKnown RBP24.68■■□□□ 1.54
CPNE1-217ENST00000439669 ARID5BQ14865 1188 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 TTC31Q49AM3 519 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-217ENST00000439669 C6orf118Q5T5N4 469 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 LRSAM1Q6UWE0 723 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 SLC41A1Q8IVJ1 513 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 ZYG11BQ9C0D3 744 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 RXFP3Q9NSD7 469 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 DLL3Q9NYJ7 618 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 OR51B4Q9Y5P0 310 aa24.68■■□□□ 1.54
CPNE1-217ENST00000439669 TARSL2A2RTX5 802 aaKnown RBP24.67■■□□□ 1.54
CPNE1-217ENST00000439669 DDX3XO00571 662 aaKnown RBP eCLIP24.67■■□□□ 1.541e-13■■■□□ 15.3
CPNE1-217ENST00000439669 IGLV3-19P01714 112 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 OR1E1P30953 314 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 ZBTB16Q05516 673 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 PPP1R15BQ5SWA1 713 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 C9orf64Q5T6V5 341 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 SETD3Q86TU7 594 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-217ENST00000439669 DNAAF5Q86Y56 855 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 CCDC185Q8N715 623 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 FOXJ1Q92949 421 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 IQCDQ96DY2 449 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 EDEM2Q9BV94 578 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 XPO4Q9C0E2 1151 aaKnown RBP24.67■■□□□ 1.54
CPNE1-217ENST00000439669 RSPH9Q9H1X1 276 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-217ENST00000439669 TMEM74BQ9NUR3 256 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 OR12D3Q9UGF7 316 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 TNRC6BQ9UPQ9 1833 aaKnown RBP24.67■■□□□ 1.54
CPNE1-217ENST00000439669 FRYLO94915 3013 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms