RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 HSP90B2PQ58FF3 399 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 RTP2Q5QGT7 225 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 SYPL2Q5VXT5 272 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC9A4Q6AI14 798 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 MSANTD2Q6P1R3 559 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 DARS2Q6PI48 645 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 GPRIN1Q7Z2K8 1008 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 CROCCP2Q86T23 111 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM131BQ86XD5 332 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 WFDC8Q8IUA0 241 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCNJLQ8IV13 435 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 CDKL3Q8IVW4 592 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 TCEAL8Q8IYN2 117 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 RNF168Q8IYW5 571 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 FIBCD1Q8N539 461 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCDC185Q8N715 623 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 PLD5Q8N7P1 536 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 PCDH19Q8TAB3 1148 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 SCAMP5Q8TAC9 235 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF461Q8TAF7 563 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ACTL9Q8TC94 416 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 DQX1Q8TE96 717 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 FBF1Q8TES7 1133 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ATG4AQ8WYN0 398 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 OVCA2Q8WZ82 227 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 NDRG1Q92597 394 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ART4Q93070 314 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 RNF34Q969K3 372 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 FBXO32Q969P5 355 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ACSF2Q96CM8 615 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 VWCEQ96DN2 955 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 C1orf74Q96LT6 269 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 SERPINB11Q96P15 392 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 CSPG4P5Q96PW8 444 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 HAPLN3Q96S86 360 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 TMEM209Q96SK2 561 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 FMO2Q99518 471 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 RAD9AQ99638 391 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 TRIM51Q9BSJ1 452 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 HTATIP2Q9BUP3 242 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 RHOBTB2Q9BYZ6 727 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 FRMD8Q9BZ67 464 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 MCOLN1Q9GZU1 580 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ADAM19Q9H013 955 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 BRD8Q9H0E9 1235 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 MUC3BQ9H195 1237 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 OSBPL2Q9H1P3 480 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 DPH5Q9H2P9 285 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 RETREG1Q9H6L5 497 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 WDCPQ9H6R7 721 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 RC3H2Q9HBD1 1191 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 PCDH9Q9HC56 1237 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 MED4Q9NPJ6 270 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 TLR8Q9NR97 1041 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 MRPL17Q9NRX2 175 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 PIGVQ9NUD9 493 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZDHHC18Q9NUE0 388 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 TMEM30AQ9NV96 361 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 DDIT4Q9NX09 232 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 FNIP2Q9P278 1114 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 VTI1BQ9UEU0 232 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 OR12D3Q9UGF7 316 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 AFF4Q9UHB7 1163 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ASIC3Q9UHC3 531 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC12A6Q9UHW9 1150 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 DNPEPQ9ULA0 475 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 TPX2Q9ULW0 747 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 R3HDM2Q9Y2K5 976 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 SNX24Q9Y343 169 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 RWDD3Q9Y3V2 267 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 INSL6Q9Y581 213 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 CDY1Q9Y6F8 540 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 MRPL42Q9Y6G3 142 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC4A7Q9Y6M7 1214 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 NUP205Q92621 2012 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 COL4A4P53420 1690 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 KIAA1671Q9BY89 1806 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ALPK3Q96L96 1907 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 MTCL1Q9Y4B5 1905 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 MYO18AQ92614 2054 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 SYNJ2BP-COX16A0A087WUM0 186 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 A0A096LPE4 126 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 A0A1W2PPZ6 126 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 A0A1W2PQH9 124 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 BCLAF3A2AJT9 711 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 GOLGA6BA6NDN3 693 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZSCAN5CA6NGD5 496 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 GOLGA6L10A6NI86 522 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC38A8A6NNN8 435 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 H7C0C1 242 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 LINC01387J3KSC0 135 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 EEF2KO00418 725 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 PRRG1O14668 218 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 PPP1R12AO14974 1030 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 FGF10O15520 208 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 IRAK2O43187 625 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 MTSS1O43312 755 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 RRP9O43818 475 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 CREB3O43889 395 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 LPXNO60711 386 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms