RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CSNK1G1Q9HCP0 422 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 PIGVQ9NUD9 493 aa14.24□□□□□ -0.13
PTCHD3-201ENST00000438700 WDR27A2RRH5 827 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 C2orf71A6NGG8 1288 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 YJEFN3A6XGL0 299 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 E7ENQ6 273 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 TOP3BO95985 862 aaKnown RBP14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 SERPINB4P48594 390 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 AP1ARQ63HQ0 302 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 NRG4Q8WWG1 115 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 SLC2A13Q96QE2 648 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 PPP1R12CQ9BZL4 782 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 HIPK3Q9H422 1215 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 PAPOLBQ9NRJ5 636 aaKnown RBP14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 PCMTD2Q9NV79 361 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 NMRK1Q9NWW6 199 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 ZFP69BQ9UJL9 534 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 A0A0A0MRY4 1105 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 CCDC195A0A1B0GUA6 201 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 TMEM189-UBE2V1I3L0A0 370 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 RNF103O00237 685 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 TRDMT1O14717 391 aaKnown RBP14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 DGKIO75912 1065 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 OR4Q2P0C623 313 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 TPSB2P20231 275 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 NOS2P35228 1153 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 SESN2P58004 480 aaPredicted RBP14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 SEMA5AQ13591 1074 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 TPSAB1Q15661 275 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 RFX8Q6ZV50 586 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 EGFL6Q8IUX8 553 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 COLGALT1Q8NBJ5 622 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 SLC7A14Q8TBB6 771 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 DTX3LQ8TDB6 740 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 DEPDC1BQ8WUY9 529 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 LRRC39Q96DD0 335 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 P2RY11Q96G91 374 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 SPATA13Q96N96 652 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 CNGB3Q9NQW8 809 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 HCSTQ9UBK5 93 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 LRFN2Q9ULH4 789 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 VWA8A3KMH1 1905 aa14.23□□□□□ -0.13
PTCHD3-201ENST00000438700 C2CD2LO14523 706 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 RFPL1O75677 317 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 FYNP06241 537 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 FESP07332 822 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 MNX1P50219 401 aaPredicted RBP14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 DEUP1Q05D60 604 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 MAPRE1Q15691 268 aaKnown RBP14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 MUM1Q2TAK8 710 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 SLC30A9Q6PML9 568 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 SLC39A5Q6ZMH5 540 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 TEX9Q8N6V9 391 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 ENDOVQ8N8Q3 282 aaKnown RBP14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 APBB2Q92870 758 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 CASD1Q96PB1 797 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 PGLYRP2Q96PD5 576 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 NPY6RQ99463 290 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 CADM1Q9BY67 442 aaKnown RBP14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 TRIM55Q9BYV6 548 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 XAB2Q9HCS7 855 aaKnown RBP14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 DMAP1Q9NPF5 467 aaPredicted RBP14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 IL1RAPL1Q9NZN1 696 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 ZNF180Q9UJW8 692 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 STAP1Q9ULZ2 295 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 HMX2A2RU54 273 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 FAM72CH0Y354 149 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 CAPN9O14815 690 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 TADA2AO75478 443 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 AMHP03971 560 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 SP100P23497 879 aaPredicted RBP14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 PSMB4P28070 264 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 PAPOLAP51003 745 aaKnown RBP14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 OLIG2Q13516 323 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 TRIM60Q495X7 471 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 FAM72AQ5TYM5 149 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 FAM72DQ6L9T8 149 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 C4orf22Q6V702 233 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 ANKRD33Q7Z3H0 272 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 FAM72BQ86X60 149 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 LMNTD2Q8IXW0 634 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 INPP5DQ92835 1189 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 NT5C3BQ969T7 300 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 PRDM12Q9H4Q4 367 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 PCDHA11Q9Y5I1 949 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 PATJQ8NI35 1801 aa14.22□□□□□ -0.13
PTCHD3-201ENST00000438700 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.21□□□□□ -0.13
PTCHD3-201ENST00000438700 H3BRJ5 948 aa14.21□□□□□ -0.13
PTCHD3-201ENST00000438700 KCNK1O00180 336 aa14.21□□□□□ -0.13
PTCHD3-201ENST00000438700 KRT36O76013 467 aa14.21□□□□□ -0.13
PTCHD3-201ENST00000438700 KRT38O76015 456 aa14.21□□□□□ -0.13
PTCHD3-201ENST00000438700 SNUPNO95149 360 aaKnown RBP14.21□□□□□ -0.13
PTCHD3-201ENST00000438700 CYP2C18P33260 490 aa14.21□□□□□ -0.13
PTCHD3-201ENST00000438700 PRKD1Q15139 912 aaPredicted RBP14.21□□□□□ -0.13
PTCHD3-201ENST00000438700 CTC1Q2NKJ3 1217 aa14.21□□□□□ -0.13
PTCHD3-201ENST00000438700 LGSNQ5TDP6 509 aa14.21□□□□□ -0.13
PTCHD3-201ENST00000438700 DEFB128Q7Z7B8 93 aa14.21□□□□□ -0.13
PTCHD3-201ENST00000438700 CHSY1Q86X52 802 aa14.21□□□□□ -0.13
PTCHD3-201ENST00000438700 SPATA2LQ8IUW3 424 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms