RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 BFARQ9NZS9 450 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 TRHDEQ9UKU6 1024 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 VANGL2Q9ULK5 521 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 TIMM13Q9Y5L4 95 aaPredicted RBP19.03■□□□□ 0.64
CLK1-205ENST00000434813 USP1O94782 785 aa19.02■□□□□ 0.64
CLK1-205ENST00000434813 PRKCGP05129 697 aa19.02■□□□□ 0.64
CLK1-205ENST00000434813 SERPINB6P35237 376 aa19.02■□□□□ 0.64
CLK1-205ENST00000434813 AFF1P51825 1210 aaKnown RBP19.02■□□□□ 0.64
CLK1-205ENST00000434813 OLIG2Q13516 323 aa19.02■□□□□ 0.64
CLK1-205ENST00000434813 TEDDM1Q5T9Z0 273 aa19.02■□□□□ 0.64
CLK1-205ENST00000434813 ITPRIPL1Q6GPH6 555 aa19.02■□□□□ 0.64
CLK1-205ENST00000434813 TMEM135Q86UB9 458 aa19.02■□□□□ 0.64
CLK1-205ENST00000434813 TREML1Q86YW5 311 aa19.02■□□□□ 0.64
CLK1-205ENST00000434813 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.02■□□□□ 0.64
CLK1-205ENST00000434813 FCRL3Q96P31 734 aaPredicted RBP19.02■□□□□ 0.64
CLK1-205ENST00000434813 RBBP8Q99708 897 aa19.02■□□□□ 0.64
CLK1-205ENST00000434813 CSNK1G1Q9HCP0 422 aa19.02■□□□□ 0.64
CLK1-205ENST00000434813 AOC2O75106 756 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 SERPINE1P05121 402 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 SERPINA6P08185 405 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 PCSK1P29120 753 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 CXCR3P49682 368 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 CES3Q6UWW8 571 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 WDR75Q8IWA0 830 aaKnown RBP19.01■□□□□ 0.63
CLK1-205ENST00000434813 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.01■□□□□ 0.63
CLK1-205ENST00000434813 ARHGAP24Q8N264 748 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 MAB21L3Q8N8X9 362 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 PIWIL2Q8TC59 973 aaKnown RBP19.01■□□□□ 0.63
CLK1-205ENST00000434813 KCNV2Q8TDN2 545 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 IRGQQ8WZA9 623 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 ZNF669Q96BR6 464 aaPredicted RBP19.01■□□□□ 0.63
CLK1-205ENST00000434813 AGAP3Q96P47 875 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 VAT1Q99536 393 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 MTG1Q9BT17 334 aaPredicted RBP19.01■□□□□ 0.63
CLK1-205ENST00000434813 CCDC106Q9BWC9 280 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 MIOSQ9NXC5 875 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 IL1RAPL1Q9NZN1 696 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 GIT1Q9Y2X7 761 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 MYADML2A6NDP7 307 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 ARL5CA6NH57 179 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 ZBTB24O43167 697 aaPredicted RBP19.01■□□□□ 0.63
CLK1-205ENST00000434813 GRK2P25098 689 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 TYK2P29597 1187 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 RPL9P32969 192 aaKnown RBP19.01■□□□□ 0.63
CLK1-205ENST00000434813 CD68P34810 354 aaPredicted RBP19.01■□□□□ 0.63
CLK1-205ENST00000434813 LIMK2P53671 638 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 CLNS1AP54105 237 aaKnown RBP19.01■□□□□ 0.63
CLK1-205ENST00000434813 ZBTB17Q13105 803 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 CTU1Q7Z7A3 348 aaKnown RBP19.01■□□□□ 0.63
CLK1-205ENST00000434813 LPPQ93052 612 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 ZNF778Q96MU6 729 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 MLPHQ9BV36 600 aaPredicted RBP19.01■□□□□ 0.63
CLK1-205ENST00000434813 SENP6Q9GZR1 1112 aaPredicted RBP19.01■□□□□ 0.63
CLK1-205ENST00000434813 TAGLN3Q9UI15 199 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 SORCS3Q9UPU3 1222 aa19.01■□□□□ 0.63
CLK1-205ENST00000434813 ZCWPW2A0A1B0GU75 182 aa19■□□□□ 0.63
CLK1-205ENST00000434813 SEPT4O43236 478 aa19■□□□□ 0.63
CLK1-205ENST00000434813 USP12O75317 370 aa19■□□□□ 0.63
CLK1-205ENST00000434813 PGK1P00558 417 aa19■□□□□ 0.63
CLK1-205ENST00000434813 SLC1A6P48664 564 aa19■□□□□ 0.63
CLK1-205ENST00000434813 SERPINB8P50452 374 aa19■□□□□ 0.63
CLK1-205ENST00000434813 SCNN1GP51170 649 aa19■□□□□ 0.63
CLK1-205ENST00000434813 SP3Q02447 781 aa19■□□□□ 0.63
CLK1-205ENST00000434813 RSPH3Q86UC2 560 aa19■□□□□ 0.63
CLK1-205ENST00000434813 TMPRSS6Q8IU80 811 aa19■□□□□ 0.63
CLK1-205ENST00000434813 REM2Q8IYK8 340 aaPredicted RBP19■□□□□ 0.63
CLK1-205ENST00000434813 MYLPFQ96A32 169 aa19■□□□□ 0.63
CLK1-205ENST00000434813 CXorf56Q9H5V9 222 aa19■□□□□ 0.63
CLK1-205ENST00000434813 WDCPQ9H6R7 721 aa19■□□□□ 0.63
CLK1-205ENST00000434813 SNX15Q9NRS6 342 aa19■□□□□ 0.63
CLK1-205ENST00000434813 COPG2Q9UBF2 871 aa19■□□□□ 0.63
CLK1-205ENST00000434813 SCN10AQ9Y5Y9 1956 aa19■□□□□ 0.63
CLK1-205ENST00000434813 ITM2AO43736 263 aa19■□□□□ 0.63
CLK1-205ENST00000434813 MAGEC1O60732 1142 aa19■□□□□ 0.63
CLK1-205ENST00000434813 LYPLA1O75608 230 aaPredicted RBP19■□□□□ 0.63
CLK1-205ENST00000434813 ENO1P06733 434 aaKnown RBP19■□□□□ 0.63
CLK1-205ENST00000434813 KCNA4P22459 653 aa19■□□□□ 0.63
CLK1-205ENST00000434813 SPRP35270 261 aaPredicted RBP19■□□□□ 0.63
CLK1-205ENST00000434813 UPP1Q16831 310 aa19■□□□□ 0.63
CLK1-205ENST00000434813 CCDC153Q494R4 210 aa19■□□□□ 0.63
CLK1-205ENST00000434813 ANKRD20A4Q4UJ75 823 aa19■□□□□ 0.63
CLK1-205ENST00000434813 KHDC1Q4VXA5 237 aaKnown RBP19■□□□□ 0.63
CLK1-205ENST00000434813 AGMOQ6ZNB7 445 aa19■□□□□ 0.63
CLK1-205ENST00000434813 SCML4Q8N228 414 aa19■□□□□ 0.63
CLK1-205ENST00000434813 DNAAF3Q8N9W5 541 aa19■□□□□ 0.63
CLK1-205ENST00000434813 EDEM1Q92611 657 aa19■□□□□ 0.63
CLK1-205ENST00000434813 DPF3Q92784 378 aa19■□□□□ 0.63
CLK1-205ENST00000434813 RTP3Q9BQQ7 232 aa19■□□□□ 0.63
CLK1-205ENST00000434813 EBF4Q9BQW3 602 aa19■□□□□ 0.63
CLK1-205ENST00000434813 TKTL2Q9H0I9 626 aa19■□□□□ 0.63
CLK1-205ENST00000434813 FAM96AQ9H5X1 160 aa19■□□□□ 0.63
CLK1-205ENST00000434813 GEMIN8Q9NWZ8 242 aaKnown RBP19■□□□□ 0.63
CLK1-205ENST00000434813 DNAJC16Q9Y2G8 782 aa19■□□□□ 0.63
CLK1-205ENST00000434813 H0Y3Z8 333 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 LRIG2O94898 1065 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 ODC1P11926 461 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 NFKB1P19838 968 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 VEGFBP49765 207 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 RAP1GDS1P52306 607 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 TUBB3Q13509 450 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms