RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 UNC5BQ8IZJ1 945 aa14.01□□□□□ -0.17
THBS3-202ENST00000428962 DQX1Q8TE96 717 aaKnown RBP14.01□□□□□ -0.17
THBS3-202ENST00000428962 AGAP11Q8TF27 550 aa14.01□□□□□ -0.17
THBS3-202ENST00000428962 RSPH1Q8WYR4 309 aa14.01□□□□□ -0.17
THBS3-202ENST00000428962 UTP4Q969X6 686 aaKnown RBP14.01□□□□□ -0.17
THBS3-202ENST00000428962 ZNF669Q96BR6 464 aaPredicted RBP14.01□□□□□ -0.17
THBS3-202ENST00000428962 NSL1Q96IY1 281 aa14.01□□□□□ -0.17
THBS3-202ENST00000428962 PKMYT1Q99640 499 aa14.01□□□□□ -0.17
THBS3-202ENST00000428962 PAAF1Q9BRP4 392 aa14.01□□□□□ -0.17
THBS3-202ENST00000428962 TBC1D10AQ9BXI6 508 aa14.01□□□□□ -0.17
THBS3-202ENST00000428962 RHOBTB2Q9BYZ6 727 aa14.01□□□□□ -0.17
THBS3-202ENST00000428962 TLE6Q9H808 572 aa14.01□□□□□ -0.17
THBS3-202ENST00000428962 PIH1D1Q9NWS0 290 aaKnown RBP14.01□□□□□ -0.17
THBS3-202ENST00000428962 PATJQ8NI35 1801 aa14□□□□□ -0.17
THBS3-202ENST00000428962 TDRD15B5MCY1 1934 aaKnown RBP14□□□□□ -0.17
THBS3-202ENST00000428962 ARHGAP42A6NI28 874 aa14□□□□□ -0.17
THBS3-202ENST00000428962 ZBTB24O43167 697 aaPredicted RBP14□□□□□ -0.17
THBS3-202ENST00000428962 MGEA5O60502 916 aa14□□□□□ -0.17
THBS3-202ENST00000428962 ADAMTS4O75173 837 aa14□□□□□ -0.17
THBS3-202ENST00000428962 ASGR1P07306 291 aa14□□□□□ -0.17
THBS3-202ENST00000428962 SRGAP2BP0DMP2 458 aa14□□□□□ -0.17
THBS3-202ENST00000428962 CTGFP29279 349 aa14□□□□□ -0.17
THBS3-202ENST00000428962 SPRP35270 261 aaPredicted RBP14□□□□□ -0.17
THBS3-202ENST00000428962 BRCC3P46736 316 aa14□□□□□ -0.17
THBS3-202ENST00000428962 SERPINB8P50452 374 aa14□□□□□ -0.17
THBS3-202ENST00000428962 E2F5Q15329 346 aa14□□□□□ -0.17
THBS3-202ENST00000428962 LINC00523Q86TU6 105 aa14□□□□□ -0.17
THBS3-202ENST00000428962 TMEM135Q86UB9 458 aa14□□□□□ -0.17
THBS3-202ENST00000428962 ARID3BQ8IVW6 561 aaPredicted RBP14□□□□□ -0.17
THBS3-202ENST00000428962 TP53INP2Q8IXH6 220 aa14□□□□□ -0.17
THBS3-202ENST00000428962 DDX51Q8N8A6 666 aaKnown RBP eCLIP14□□□□□ -0.17
THBS3-202ENST00000428962 AGAP3Q96P47 875 aa14□□□□□ -0.17
THBS3-202ENST00000428962 PPP1R2P1Q96PQ5 205 aa14□□□□□ -0.17
THBS3-202ENST00000428962 GORASP1Q9BQQ3 440 aa14□□□□□ -0.17
THBS3-202ENST00000428962 IL22Q9GZX6 179 aa14□□□□□ -0.17
THBS3-202ENST00000428962 FAM96AQ9H5X1 160 aa14□□□□□ -0.17
THBS3-202ENST00000428962 NOP53Q9NZM5 478 aaKnown RBP14□□□□□ -0.17
THBS3-202ENST00000428962 FAM237BA0A1B0GVD1 139 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 A8MUI8 341 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 FGF10O15520 208 aaPredicted RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 IGLV3-25P01717 112 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 ERVK-10P10266 1014 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 NFKB1P19838 968 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 TYK2P29597 1187 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 ZBTB17Q13105 803 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 PDE1CQ14123 709 aaPredicted RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 LPIN1Q14693 890 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 TBCCQ15814 346 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 PAN2Q504Q3 1202 aaKnown RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 FASTKD1Q53R41 847 aaKnown RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 WASHC2DQ5SRD0 308 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 N4BP2L1Q5TBK1 243 aaPredicted RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 SPATA2LQ8IUW3 424 aaPredicted RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 ISL2Q96A47 359 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 PTCD3Q96EY7 689 aaKnown RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 SUSD3Q96L08 255 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 TEKT5Q96M29 485 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 HAPLN3Q96S86 360 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 ADAM2Q99965 735 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 STN1Q9H668 368 aaKnown RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 ABCC13Q9NSE7 274 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 ARHGEF38Q9NXL2 777 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 NOD1Q9Y239 953 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 INPP5FQ9Y2H2 1132 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 HBS1LQ9Y450 684 aaKnown RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 SQORQ9Y6N5 450 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 FCHO1O14526 889 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 IRAK2O43187 625 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 PLIN3O60664 434 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 AMHP03971 560 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 CST5P28325 142 aaPredicted RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 CD68P34810 354 aaPredicted RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 LIMK2P53671 638 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 CDH17Q12864 832 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 CCDC153Q494R4 210 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 BTBD8Q5XKL5 378 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 CTU1Q7Z7A3 348 aaKnown RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 WDR75Q8IWA0 830 aaKnown RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 LZTR1Q8N653 840 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 PCSK9Q8NBP7 692 aaKnown RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 SH3TC2Q8TF17 1288 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 TSGA13Q96PP4 275 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 RBBP8Q99708 897 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 BTBD10Q9BSF8 475 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 SMOC2Q9H3U7 446 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 CATSPERBQ9H7T0 1116 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 EBF2Q9HAK2 575 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 FBXO6Q9NRD1 293 aaPredicted RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 NSMCE4AQ9NXX6 385 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 SLC17A6Q9P2U8 582 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 PCDHB8Q9UN66 801 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 PSAT1Q9Y617 370 aa13.99□□□□□ -0.17
THBS3-202ENST00000428962 MYO18AQ92614 2054 aaKnown RBP13.99□□□□□ -0.17
THBS3-202ENST00000428962 INPPL1O15357 1258 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 TIMM44O43615 452 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 ALDH1A1P00352 501 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 SERPINE1P05121 402 aa13.98□□□□□ -0.17
THBS3-202ENST00000428962 ESRRAP11474 423 aaPredicted RBP13.98□□□□□ -0.17
THBS3-202ENST00000428962 IBSPP21815 317 aaPredicted RBP13.98□□□□□ -0.17
THBS3-202ENST00000428962 CCNCP24863 283 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms