RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 IGLV3-25P01717 112 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 HLA-EP13747 358 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 KRT9P35527 623 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 HNF1BP35680 557 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 SOX5P35711 763 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 GRK6P43250 576 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 CSNK1EP49674 416 aaKnown RBP11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 CCT8P50990 548 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 C19orf57Q0VDD7 668 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 EIF4EBP2Q13542 120 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 ZNF234Q14588 700 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 EIF4HQ15056 248 aaKnown RBP11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 GEN1Q17RS7 908 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 LRRC69Q6ZNQ3 347 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 RSRC2Q7L4I2 434 aaKnown RBP11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 FMNL3Q8IVF7 1028 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 NEK11Q8NG66 645 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 BAHD1Q8TBE0 780 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 PIP4K2CQ8TBX8 421 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 DDI1Q8WTU0 396 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 PLD4Q96BZ4 506 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 PPP1R13BQ96KQ4 1090 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 BBC3Q96PG8 261 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 UBL7Q96S82 380 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 MIS12Q9H081 205 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 NLRC4Q9NPP4 1024 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 ST7Q9NRC1 585 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 FTSJ1Q9UET6 329 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 SFMBT1Q9UHJ3 866 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 STOML2Q9UJZ1 356 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 AGO1Q9UL18 857 aaKnown RBP11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 STRIP2Q9ULQ0 834 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 SLC27A6Q9Y2P4 619 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 ITPR1Q14643 2758 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 LOC400499M0QZD8 3231 aa11.24□□□□□ -0.61
APOBEC3C-202ENST00000428892 A0A1W2PQC6 194 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 SLC12A8A0AV02 714 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 GFPT2O94808 682 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 ZIC2O95409 532 aaPredicted RBP11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 LSM8O95777 96 aaKnown RBP11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 DNTTP04053 509 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 ERBB2P04626 1255 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 GLI1P08151 1106 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 MMEP08473 750 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 CHRNB2P17787 502 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 CORO1AP31146 461 aaKnown RBP11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 GABRB2P47870 512 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 C21orf59P57076 290 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 NOMO3P69849 1222 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 NNTQ13423 1086 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 NR1I3Q14994 352 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 TAF5Q15542 800 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 TMEM259Q4ZIN3 620 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 FNDC3BQ53EP0 1204 aaKnown RBP11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 C6orf118Q5T5N4 469 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 OLFML1Q6UWY5 402 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 ZNF677Q86XU0 584 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 MARCH9Q86YJ5 346 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 DQX1Q8TE96 717 aaKnown RBP11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 RNF139Q8WU17 664 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 SLC20A1Q8WUM9 679 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 BAP1Q92560 729 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 NXPE2Q96DL1 559 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 SLC2A13Q96QE2 648 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 TTYH3Q9C0H2 523 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 PCED1AQ9H1Q7 454 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 ASNSD1Q9NWL6 643 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 ELOVL2Q9NXB9 296 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 TOR4AQ9NXH8 423 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 NAALADL1Q9UQQ1 740 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 BTBD3Q9Y2F9 522 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 SNX11Q9Y5W9 270 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 COL5A1P20908 1838 aaPredicted RBP11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 CABIN1Q9Y6J0 2220 aa11.23□□□□□ -0.61
APOBEC3C-202ENST00000428892 CELSR3Q9NYQ7 3312 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 MSI1O43347 362 aaKnown RBP11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 FSBPO95073 299 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 LATS1O95835 1130 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 PENKP01210 267 aaPredicted RBP11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 CYP1A1P04798 512 aaPredicted RBP11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 PRKCHP24723 683 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 PBX1P40424 430 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 STAT1P42224 750 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 GRIA4P48058 902 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 ZNF75DP51815 510 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 COPAP53621 1224 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 YWHAZP63104 245 aaKnown RBP11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 IL9RQ01113 521 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 FMO1Q01740 532 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 CDR2Q01850 454 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 KIF19Q2TAC6 998 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 TTC31Q49AM3 519 aaPredicted RBP11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 TAF3Q5VWG9 929 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 FYB2Q5VWT5 728 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 SYPL2Q5VXT5 272 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 DHRS13Q6UX07 377 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 FAM183BPQ6ZVS7 135 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 DENND1CQ8IV53 801 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 CPXM2Q8N436 756 aa11.22□□□□□ -0.61
APOBEC3C-202ENST00000428892 TMEM35BQ8NCS4 154 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms