RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 FUT11Q495W5 492 aa14.96□□□□□ -0.01
SGCE-204ENST00000428696 EOGTQ5NDL2 527 aa14.96□□□□□ -0.01
SGCE-204ENST00000428696 HEATR6Q6AI08 1181 aaKnown RBP14.96□□□□□ -0.01
SGCE-204ENST00000428696 IL31Q6EBC2 164 aa14.96□□□□□ -0.01
SGCE-204ENST00000428696 SERPINA13PQ6UXR4 307 aa14.96□□□□□ -0.01
SGCE-204ENST00000428696 TRMT11Q7Z4G4 463 aaKnown RBP14.96□□□□□ -0.01
SGCE-204ENST00000428696 PGBD3Q8N328 593 aa14.96□□□□□ -0.01
SGCE-204ENST00000428696 IL17RCQ8NAC3 791 aa14.96□□□□□ -0.01
SGCE-204ENST00000428696 ATRIPQ8WXE1 791 aa14.96□□□□□ -0.01
SGCE-204ENST00000428696 FEM1AQ9BSK4 669 aa14.96□□□□□ -0.01
SGCE-204ENST00000428696 CALN1Q9BXU9 219 aa14.96□□□□□ -0.01
SGCE-204ENST00000428696 CATSPERBQ9H7T0 1116 aa14.96□□□□□ -0.01
SGCE-204ENST00000428696 C2orf42Q9NWW7 574 aa14.96□□□□□ -0.01
SGCE-204ENST00000428696 PPARGC1AQ9UBK2 798 aaKnown RBP14.96□□□□□ -0.01
SGCE-204ENST00000428696 COL4A2P08572 1712 aa14.96□□□□□ -0.01
SGCE-204ENST00000428696 SGK1O00141 431 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 CBX4O00257 560 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 ZBTB24O43167 697 aaPredicted RBP14.95□□□□□ -0.02
SGCE-204ENST00000428696 MTA2O94776 668 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 KRT7P08729 469 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 NTSR1P30989 418 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 PXNP49023 591 aaPredicted RBP14.95□□□□□ -0.02
SGCE-204ENST00000428696 CCR3P51677 355 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 SLC25A11Q02978 314 aaKnown RBP14.95□□□□□ -0.02
SGCE-204ENST00000428696 SLC12A1Q13621 1099 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 DMC1Q14565 340 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 C5orf22Q49AR2 442 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 ACCSLQ4AC99 568 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 CXorf57Q6NSI4 855 aaKnown RBP14.95□□□□□ -0.02
SGCE-204ENST00000428696 CYP4V2Q6ZWL3 525 aaPredicted RBP14.95□□□□□ -0.02
SGCE-204ENST00000428696 PSTKQ8IV42 348 aaKnown RBP14.95□□□□□ -0.02
SGCE-204ENST00000428696 OR7D4Q8NG98 312 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 OR52K2Q8NGK3 314 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 ACDQ96AP0 544 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 RPL10LQ96L21 214 aaKnown RBP14.95□□□□□ -0.02
SGCE-204ENST00000428696 CWC15Q9P013 229 aaKnown RBP14.95□□□□□ -0.02
SGCE-204ENST00000428696 SALL4Q9UJQ4 1053 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 INTS6Q9UL03 887 aaKnown RBP14.95□□□□□ -0.02
SGCE-204ENST00000428696 GUCA1BQ9UMX6 200 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 TBC1D30Q9Y2I9 924 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 ADGRG1Q9Y653 693 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 ALG6Q9Y672 507 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 STON1Q9Y6Q2 735 aa14.95□□□□□ -0.02
SGCE-204ENST00000428696 ATG2BQ96BY7 2078 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 A0A0A6YYK5 440 aaPredicted RBP14.94□□□□□ -0.02
SGCE-204ENST00000428696 A0A0D9SEW6 157 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 SYNCRIPO60506 623 aaKnown RBP14.94□□□□□ -0.02
SGCE-204ENST00000428696 DLDP09622 509 aaKnown RBP14.94□□□□□ -0.02
SGCE-204ENST00000428696 CCDC175P0C221 793 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 AMPD1P23109 780 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 MAN1A1P33908 653 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 NNMTP40261 264 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 SLC1A1P43005 524 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 ECT2LQ008S8 904 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 NRG1Q02297 640 aaPredicted RBP14.94□□□□□ -0.02
SGCE-204ENST00000428696 GNA12Q03113 381 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 ZNF234Q14588 700 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 POLD3Q15054 466 aaPredicted RBP14.94□□□□□ -0.02
SGCE-204ENST00000428696 EIF4HQ15056 248 aaKnown RBP14.94□□□□□ -0.02
SGCE-204ENST00000428696 IFI16Q16666 785 aaKnown RBP14.94□□□□□ -0.02
SGCE-204ENST00000428696 PLEKHG6Q3KR16 790 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 MANEALQ5VSG8 457 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 LEKR1Q6ZMV7 388 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 RFX8Q6ZV50 586 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 SETD3Q86TU7 594 aaPredicted RBP14.94□□□□□ -0.02
SGCE-204ENST00000428696 ZNF366Q8N895 744 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 TPCN2Q8NHX9 752 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 KIAA1524Q8TCG1 905 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 TEKT4Q8WW24 435 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 HHIPQ96QV1 700 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 ATP13A1Q9HD20 1204 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 LZTFL1Q9NQ48 299 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 NDFIP2Q9NV92 336 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 HPCAL4Q9UM19 191 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 STARD13Q9Y3M8 1113 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 RAD54BQ9Y620 910 aa14.94□□□□□ -0.02
SGCE-204ENST00000428696 CHURC1-FNTBB4DL54 471 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 H0Y858 1186 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 BNIP3LO60238 219 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 RAMP2O60895 175 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 EPHX1P07099 455 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 HLA-EP13747 358 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 HOXB2P14652 356 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 HOXC13P31276 330 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 ACVRL1P37023 503 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 STK19P49842 368 aaPredicted RBP14.93□□□□□ -0.02
SGCE-204ENST00000428696 CCZ1BP86790 482 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 CCZ1P86791 482 aaPredicted RBP14.93□□□□□ -0.02
SGCE-204ENST00000428696 MMRN1Q13201 1228 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 TCEAL1Q15170 157 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 E2F5Q15329 346 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 ANGPT1Q15389 498 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 LINGO4Q6UY18 593 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 SYT13Q7L8C5 426 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 KIAA0907Q7Z7F0 614 aaPredicted RBP14.93□□□□□ -0.02
SGCE-204ENST00000428696 MAP7D3Q8IWC1 876 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 RHOT1Q8IXI2 618 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.93□□□□□ -0.02
SGCE-204ENST00000428696 RTL3Q8N8U3 475 aaKnown RBP14.93□□□□□ -0.02
SGCE-204ENST00000428696 NETO2Q8NC67 525 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms