RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 GEMIN4P57678 1058 aaKnown RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 RPS24P62847 133 aaKnown RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 PITX1P78337 314 aaPredicted RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 KRT83P78385 493 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 ECT2LQ008S8 904 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 CCDC15Q0P6D6 951 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 LMAN2Q12907 356 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 ZNF177Q13360 481 aaPredicted RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 ELAVL3Q14576 367 aaKnown RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 PUM1Q14671 1186 aaKnown RBP eCLIP9.41□□□□□ -0.91e-13■■■■□ 21.4
SMC1A-203ENST00000428014 FUT11Q495W5 492 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 PITRM1Q5JRX3 1037 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 ARTNQ5T4W7 220 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 TAF3Q5VWG9 929 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 CXorf57Q6NSI4 855 aaKnown RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 RFWD3Q6PCD5 774 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 SARM1Q6SZW1 724 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 MMS22LQ6ZRQ5 1243 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 SYT12Q8IV01 421 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 SFTPA1Q8IWL2 248 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 LGI2Q8N0V4 545 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 CCDC33Q8N5R6 958 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 DCAF4L2Q8NA75 395 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 TTC13Q8NBP0 860 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 SLC20A1Q8WUM9 679 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 CASKIN2Q8WXE0 1202 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 CPA5Q8WXQ8 436 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 DNASE2BQ8WZ79 361 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 PRCCQ92733 491 aaPredicted RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 RNF34Q969K3 372 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 NAP1L5Q96NT1 182 aaPredicted RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 RPRD1AQ96P16 312 aaPredicted RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 PCDHB18PQ96TA0 734 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 TBCBQ99426 244 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 RTKNQ9BST9 563 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 SELENOOQ9BVL4 669 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 CIPCQ9C0C6 399 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 RSPH9Q9H1X1 276 aaPredicted RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 PRDM16Q9HAZ2 1276 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 SEMA4GQ9NTN9 838 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 WSB2Q9NYS7 404 aaPredicted RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 ZNF212Q9UDV6 495 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 ADAMTS1Q9UHI8 967 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 INTS6Q9UL03 887 aaKnown RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 FZD4Q9ULV1 537 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 LUC7L2Q9Y383 392 aaKnown RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 GON4LQ3T8J9 2241 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 SDK1Q7Z5N4 2213 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 PI4KAP42356 2102 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 FRYLO94915 3013 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 NUP205Q92621 2012 aa9.41□□□□□ -0.9
SMC1A-203ENST00000428014 CNOT1A5YKK6 2376 aaKnown RBP9.41□□□□□ -0.9
SMC1A-203ENST00000428014 RALGAPA1Q6GYQ0 2036 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 IGHV1OR15-9A0A0B4J2B8 117 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 ZSCAN5CA6NGD5 496 aaPredicted RBP9.4□□□□□ -0.9
SMC1A-203ENST00000428014 UPK3BL1B0FP48 263 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 UPK3BL2E5RIL1 263 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 RNASEH1O60930 286 aaKnown RBP9.4□□□□□ -0.9
SMC1A-203ENST00000428014 RHOQP17081 205 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 NDUFV2P19404 249 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 GPD1P21695 349 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 CD6P30203 668 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 CD70P32970 193 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 PCK1P35558 622 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 CSKP41240 450 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 SGSHP51688 502 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 YBEYP58557 167 aaPredicted RBP9.4□□□□□ -0.9
SMC1A-203ENST00000428014 KLHL30Q0D2K2 578 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 NME3Q13232 169 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 ASIC2Q16515 512 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 CCDC14Q49A88 953 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 TTC31Q49AM3 519 aaPredicted RBP9.4□□□□□ -0.9
SMC1A-203ENST00000428014 RAP1GAP2Q684P5 730 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 HGSNATQ68CP4 663 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 SPECC1LQ69YQ0 1117 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 TRNP1Q6NT89 227 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 DNAJC24Q6P3W2 148 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 SLC23A3Q6PIS1 610 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 PRR23BQ6ZRT6 265 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 DSG4Q86SJ6 1040 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 LUZP1Q86V48 1076 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 TMPRSS6Q8IU80 811 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 NIPA2Q8N8Q9 360 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 ADAM32Q8TC27 787 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 RXFP2Q8WXD0 754 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 ISG20Q96AZ6 181 aaKnown RBP9.4□□□□□ -0.9
SMC1A-203ENST00000428014 SIPA1Q96FS4 1042 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 LRIG1Q96JA1 1093 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 MRGPRX3Q96LB0 322 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 ACOX2Q99424 681 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 C11orf70Q9BRQ4 267 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 FEM1AQ9BSK4 669 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 ZDHHC5Q9C0B5 715 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 ZYG11BQ9C0D3 744 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 CEP44Q9C0F1 390 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 MKRN2Q9H000 416 aaKnown RBP9.4□□□□□ -0.9
SMC1A-203ENST00000428014 MAGEH1Q9H213 219 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 HAUS4Q9H6D7 363 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 SGK2Q9HBY8 427 aa9.4□□□□□ -0.9
SMC1A-203ENST00000428014 CACNA2D2Q9NY47 1150 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms