RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 FOXJ1Q92949 421 aa13.16□□□□□ -0.3
SGCE-203ENST00000425444 SLC39A13Q96H72 371 aa13.16□□□□□ -0.3
SGCE-203ENST00000425444 ZNF419Q96HQ0 510 aaPredicted RBP13.16□□□□□ -0.3
SGCE-203ENST00000425444 PRICKLE1Q96MT3 831 aaPredicted RBP13.16□□□□□ -0.3
SGCE-203ENST00000425444 SLC2A13Q96QE2 648 aa13.16□□□□□ -0.3
SGCE-203ENST00000425444 STK33Q9BYT3 514 aa13.16□□□□□ -0.3
SGCE-203ENST00000425444 IRX2Q9BZI1 471 aaPredicted RBP13.16□□□□□ -0.3
SGCE-203ENST00000425444 NUCKS1Q9H1E3 243 aaKnown RBP13.16□□□□□ -0.3
SGCE-203ENST00000425444 SLC6A17Q9H1V8 727 aa13.16□□□□□ -0.3
SGCE-203ENST00000425444 GAREM1Q9H706 876 aa13.16□□□□□ -0.3
SGCE-203ENST00000425444 TM7SF3Q9NS93 570 aa13.16□□□□□ -0.3
SGCE-203ENST00000425444 FAM207AQ9NSI2 230 aaPredicted RBP13.16□□□□□ -0.3
SGCE-203ENST00000425444 ASNSD1Q9NWL6 643 aa13.16□□□□□ -0.3
SGCE-203ENST00000425444 MUC22E2RYF6 1773 aaPredicted RBP13.15□□□□□ -0.3
SGCE-203ENST00000425444 E9PAM4 449 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 TIMM44O43615 452 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 DAB1O75553 588 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 CER1O95813 267 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 EPHX1P07099 455 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 ZNF883P0CG24 379 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 CDK11BP21127 795 aaKnown RBP13.15□□□□□ -0.3
SGCE-203ENST00000425444 ABCB4P21439 1286 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 KLK7P49862 253 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 COPB1P53618 953 aaKnown RBP13.15□□□□□ -0.3
SGCE-203ENST00000425444 PITX1P78337 314 aaPredicted RBP13.15□□□□□ -0.3
SGCE-203ENST00000425444 SMAD1Q15797 465 aaKnown RBP13.15□□□□□ -0.3
SGCE-203ENST00000425444 FUT11Q495W5 492 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 TAF1BQ53T94 588 aaPredicted RBP13.15□□□□□ -0.3
SGCE-203ENST00000425444 MS4A13Q5J8X5 152 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 RAP1GAP2Q684P5 730 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 TMEM215Q68D42 235 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 NADSYN1Q6IA69 706 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 DPY19L2P1Q6NXN4 242 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 PCSK4Q6UW60 755 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 OLFML1Q6UWY5 402 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 CACUL1Q86Y37 369 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 CARNMT1Q8N4J0 409 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.15□□□□□ -0.3
SGCE-203ENST00000425444 MSANTD4Q8NCY6 345 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 CYB5D2Q8WUJ1 264 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 NXPE2Q96DL1 559 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 BTN2A3PQ96KV6 586 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 SPAG5Q96R06 1193 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 NAA15Q9BXJ9 866 aaKnown RBP13.15□□□□□ -0.3
SGCE-203ENST00000425444 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.3
SGCE-203ENST00000425444 PLA2G4CQ9UP65 541 aa13.15□□□□□ -0.3
SGCE-203ENST00000425444 FNDC3AQ9Y2H6 1198 aaKnown RBP13.15□□□□□ -0.3
SGCE-203ENST00000425444 A0A1B0GTW7 788 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 F5H5T6 163 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 FLRT2O43155 660 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 TLX3O43711 291 aaPredicted RBP13.14□□□□□ -0.31
SGCE-203ENST00000425444 GFPT2O94808 682 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 IGLV3-25P01717 112 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 ATP5BP06576 529 aaKnown RBP13.14□□□□□ -0.31
SGCE-203ENST00000425444 SLC2A3P11169 496 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 POLR2EP19388 210 aaKnown RBP13.14□□□□□ -0.31
SGCE-203ENST00000425444 TACR2P21452 398 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 PRKCHP24723 683 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 CCR1P32246 355 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 CD70P32970 193 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 MATKP42679 507 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 POLR2FP61218 127 aaKnown RBP13.14□□□□□ -0.31
SGCE-203ENST00000425444 RPS24P62847 133 aaKnown RBP13.14□□□□□ -0.31
SGCE-203ENST00000425444 SLC6A3Q01959 620 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 TYRO3Q06418 890 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 NME3Q13232 169 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 SYCP1Q15431 976 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 FAM102AQ5T9C2 384 aaPredicted RBP13.14□□□□□ -0.31
SGCE-203ENST00000425444 MBLAC2Q68D91 279 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 SLC26A9Q7LBE3 791 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 NOP9Q86U38 636 aaKnown RBP13.14□□□□□ -0.31
SGCE-203ENST00000425444 ERICH1Q86X53 443 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 ZDHHC17Q8IUH5 632 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 LGI2Q8N0V4 545 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 CFAP52Q8N1V2 620 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 ZCCHC9Q8N567 271 aaKnown RBP13.14□□□□□ -0.31
SGCE-203ENST00000425444 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 FAM181AQ8N9Y4 354 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 WFDC5Q8TCV5 224 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 EPS8L1Q8TE68 723 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 PRCCQ92733 491 aaPredicted RBP13.14□□□□□ -0.31
SGCE-203ENST00000425444 MRGPRX1Q96LB2 322 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 NAT10Q9H0A0 1025 aaKnown RBP13.14□□□□□ -0.31
SGCE-203ENST00000425444 MIR1-1HGQ9H1L0 117 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 GANQ9H2C0 597 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 CD248Q9HCU0 757 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 NLRC4Q9NPP4 1024 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 TMEM63CQ9P1W3 806 aa13.14□□□□□ -0.31
SGCE-203ENST00000425444 XPO7Q9UIA9 1087 aaKnown RBP13.14□□□□□ -0.31
SGCE-203ENST00000425444 AHCTF1Q8WYP5 2266 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 LGALS16A8MUM7 142 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 MEI4A8MW99 385 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 KCNU1A8MYU2 1149 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 LSM8O95777 96 aaKnown RBP13.13□□□□□ -0.31
SGCE-203ENST00000425444 ACADMP11310 421 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 NOS2P35228 1153 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 RNASE9P60153 205 aaKnown RBP13.13□□□□□ -0.31
SGCE-203ENST00000425444 ST8SIA6P61647 398 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 UBXN1Q04323 297 aa13.13□□□□□ -0.31
SGCE-203ENST00000425444 ENPP2Q13822 863 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms