RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ELAC1Q9H777 363 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 FAIMQ9NVQ4 179 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.64□□□□□ -1.834e-6■■■■□ 20.4
TOP2A-201ENST00000423485 KIF13BQ9NQT8 1826 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 FAM234BA2RU67 622 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 SNAP23O00161 211 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 SLC31A1O15431 190 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 SYNGR4O95473 234 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 CYBAP13498 195 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 SERPINB6P35237 376 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ARHGDIBP52566 201 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 MRPS22P82650 360 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 OVGP1Q12889 678 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 TIGD6Q17RP2 521 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 QRICH1Q2TAL8 776 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 RAET1GQ6H3X3 334 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 SLC30A9Q6PML9 568 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 C17orf53Q8N3J3 647 aaPredicted RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 C3orf20Q8ND61 904 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 EHBP1Q8NDI1 1231 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 PPP4R1Q8TF05 950 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ULK4Q96C45 1275 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 PAIP2Q9BPZ3 127 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 OPA3Q9H6K4 179 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 FBXL12Q9NXK8 326 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ARL15Q9NXU5 204 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 MTRF1LQ9UGC7 380 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 HS3ST4Q9Y661 456 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 MYO7AQ13402 2215 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 PTPRFP10586 1907 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 A1L4Q6 167 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 CFAP69A5D8W1 941 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 A8MU76 341 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 POLR1CO15160 346 aaPredicted RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 SEMA4FO95754 770 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ENO2P09104 434 aaPredicted RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 UQCRC1P31930 480 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 PBX2P40425 430 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 GSCP56915 257 aaPredicted RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 RIPPLY3P57055 190 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ACY1Q03154 408 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 VAC14Q08AM6 782 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 RPS6KA2Q15349 733 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 AMHR2Q16671 573 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 CASC4Q6P4E1 433 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 CYB5R4Q7L1T6 521 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 PLXDC1Q8IUK5 500 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ARID3BQ8IVW6 561 aaPredicted RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 CHCHD4Q8N4Q1 142 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 APOBEC4Q8WW27 367 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 CEP95Q96GE4 821 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 INTS4Q96HW7 963 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 GDF15Q99988 308 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 HERC2P3Q9BVR0 1158 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 BEX2Q9BXY8 128 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 CPEB1Q9BZB8 566 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ZDHHC6Q9H6R6 413 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ARHGEF38Q9NXL2 777 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 AFF4Q9UHB7 1163 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 TELO2Q9Y4R8 837 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 COPG1Q9Y678 874 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 MTCH2Q9Y6C9 303 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 NUMBLQ9Y6R0 609 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF831Q5JPB2 1677 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 CREB3O43889 395 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 KIAA0754O94854 1291 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 EDN1P05305 212 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 SP9P0CG40 484 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 MLH1P40692 756 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 MSH2P43246 934 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 CLCN3P51790 818 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 MFAP3P55082 362 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 RPS3AP61247 264 aaKnown RBP3.63□□□□□ -1.83
TOP2A-201ENST00000423485 ACSM2AQ08AH3 577 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 KRT39Q6A163 491 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 TTC19Q6DKK2 380 aaPredicted RBP3.63□□□□□ -1.83
TOP2A-201ENST00000423485 MTHFD1LQ6UB35 978 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 DENND5BQ6ZUT9 1274 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 ADGRF2Q8IZF7 708 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 FANCBQ8NB91 859 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 TMEM178AQ8NBL3 297 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 HES6Q96HZ4 224 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 MRM3Q9HC36 420 aaKnown RBP3.63□□□□□ -1.83
TOP2A-201ENST00000423485 KCNJ16Q9NPI9 418 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 KCNH7Q9NS40 1196 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 FAM105AQ9NUU6 356 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 TAS2R16Q9NYV7 291 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 REV1Q9UBZ9 1251 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 LUC7L2Q9Y383 392 aaKnown RBP3.63□□□□□ -1.83
TOP2A-201ENST00000423485 DNMT3AQ9Y6K1 912 aaPredicted RBP3.63□□□□□ -1.83
TOP2A-201ENST00000423485 DUSP10Q9Y6W6 482 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 EML5Q05BV3 1969 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 C19orf67A6NJJ6 358 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 RTCAO00442 366 aaKnown RBP3.63□□□□□ -1.83
TOP2A-201ENST00000423485 ABLIM1O14639 778 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 LDB2O43679 373 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 HSF2BPO75031 334 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 NPR3P17342 541 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms