RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 HCN2Q9UL51 889 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 RAD54BQ9Y620 910 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 K7ESF4 209 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 DAPK3O43293 454 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 SYNCRIPO60506 623 aaKnown RBP16.19■□□□□ 0.18
BRAT1-202ENST00000421712 PAPSS2O95340 614 aaPredicted RBP16.19■□□□□ 0.18
BRAT1-202ENST00000421712 ASLP04424 464 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 RHOQP17081 205 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 HOXC13P31276 330 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 GJC1P36383 396 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 IL12RB1P42701 662 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 FNTBP49356 437 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 TPI1P60174 286 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 ECT2LQ008S8 904 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 SMTNL2Q2TAL5 461 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 ZNF528Q3MIS6 628 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 BOLA3Q53S33 107 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 PPP6R3Q5H9R7 873 aaPredicted RBP16.19■□□□□ 0.18
BRAT1-202ENST00000421712 ZFYVE27Q5T4F4 411 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 ANO7Q6IWH7 933 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 TMEM92Q6UXU6 159 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 SETD3Q86TU7 594 aaPredicted RBP16.19■□□□□ 0.18
BRAT1-202ENST00000421712 CAMKK1Q8N5S9 505 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 NIPA2Q8N8Q9 360 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 RFFLQ8WZ73 363 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 TTC17Q96AE7 1141 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 FEM1AQ9BSK4 669 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 SPON2Q9BUD6 331 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 FAM126AQ9BYI3 521 aaPredicted RBP16.19■□□□□ 0.18
BRAT1-202ENST00000421712 CATSPERBQ9H7T0 1116 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 FAM86C1Q9NVL1 165 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 ZSCAN32Q9NX65 697 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 DNAI1Q9UI46 699 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 INTS6Q9UL03 887 aaKnown RBP16.19■□□□□ 0.18
BRAT1-202ENST00000421712 TBC1D30Q9Y2I9 924 aa16.19■□□□□ 0.18
BRAT1-202ENST00000421712 TCRBV21S2A2A0A5A6 115 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 PROSCO94903 275 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 LCA5LO95447 670 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 EPHX1P07099 455 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 CHRM1P11229 460 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-202ENST00000421712 FECHP22830 423 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 NNMTP40261 264 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 CTSOP43234 321 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-202ENST00000421712 KRT83P78385 493 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 SULT2A1Q06520 285 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 DMWDQ09019 674 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 CA9Q16790 459 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 KCNT1Q5JUK3 1230 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 MANEALQ5VSG8 457 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 ZC3H14Q6PJT7 736 aaKnown RBP16.18■□□□□ 0.18
BRAT1-202ENST00000421712 RAD9BQ6WBX8 426 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 ZNF354CQ86Y25 554 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 OR52K2Q8NGK3 314 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 HMGB4Q8WW32 186 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 ANP32BQ92688 251 aaKnown RBP16.18■□□□□ 0.18
BRAT1-202ENST00000421712 RPL10LQ96L21 214 aaKnown RBP16.18■□□□□ 0.18
BRAT1-202ENST00000421712 GABRG3Q99928 467 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 ERVW-1Q9UQF0 538 aa16.18■□□□□ 0.18
BRAT1-202ENST00000421712 WDFY4Q6ZS81 3184 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 EEF2KO00418 725 aaKnown RBP16.17■□□□□ 0.18
BRAT1-202ENST00000421712 HLA-EP13747 358 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 TCF4P15884 667 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 PRKCHP24723 683 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 IL1R2P27930 398 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 ARHGAP25P42331 645 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 MAPKAPK2P49137 400 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 PLK1P53350 603 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 NAP1L1P55209 391 aaKnown RBP16.17■□□□□ 0.18
BRAT1-202ENST00000421712 KRT81Q14533 505 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 PTPRNQ16849 979 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 IL31Q6EBC2 164 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 KIAA1328Q86T90 577 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 LONP2Q86WA8 852 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 PSTKQ8IV42 348 aaKnown RBP16.17■□□□□ 0.18
BRAT1-202ENST00000421712 ZNF366Q8N895 744 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 KCTD15Q96SI1 283 aaPredicted RBP16.17■□□□□ 0.18
BRAT1-202ENST00000421712 RETREG1Q9H6L5 497 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 TMEM248Q9NWD8 314 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 SUN2Q9UH99 717 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 SLC25A13Q9UJS0 675 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 TFR2Q9UP52 801 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 R4GN57 208 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 DOCK4Q8N1I0 1966 aa16.17■□□□□ 0.18
BRAT1-202ENST00000421712 A0A0D9SEW6 157 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 ILVBLA1L0T0 632 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 AXIN1O15169 862 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 SRPRAP08240 638 aaKnown RBP16.16■□□□□ 0.18
BRAT1-202ENST00000421712 RARAP10276 462 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 TDGF1P13385 188 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 HOXA6P31267 233 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 HTR7P34969 479 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 ARL4AP40617 200 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 GNA12Q03113 381 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 ACCSLQ4AC99 568 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 ARTNQ5T4W7 220 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 KIAA1211LQ6NV74 962 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 NLRP14Q86W24 1093 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 RTL3Q8N8U3 475 aaKnown RBP16.16■□□□□ 0.18
BRAT1-202ENST00000421712 ACRBPQ8NEB7 543 aa16.16■□□□□ 0.18
BRAT1-202ENST00000421712 OR7D4Q8NG98 312 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms