RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CCDC33Q8N5R6 958 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 COG1Q8WTW3 980 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 XPO6Q96QU8 1125 aaKnown RBP16.13■□□□□ 0.17
DDX55-203ENST00000421670 NOL6Q9H6R4 1146 aaKnown RBP16.13■□□□□ 0.17
DDX55-203ENST00000421670 ABCB8Q9NUT2 735 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 ATG2BQ96BY7 2078 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 ESPNB1AK53 854 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 SPECC1L-ADORA2AF8WAN1 911 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 APOL1O14791 398 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 ZNF185O15231 689 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 CEP104O60308 925 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 CST8O60676 142 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 RHOCP08134 193 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 CTHP32929 405 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 PTPN7P35236 360 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 CETN2P41208 172 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 CSKP41240 450 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 MAPKAPK2P49137 400 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 DGKGP49619 791 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 LMAN2Q12907 356 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 C6orf118Q5T5N4 469 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 PAPD7Q5XG87 772 aaKnown RBP16.13■□□□□ 0.17
DDX55-203ENST00000421670 TXNDC11Q6PKC3 985 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 NPNTQ6UXI9 565 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 FIBINQ8TAL6 211 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 ZNF592Q92610 1267 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 HAUS1Q96CS2 278 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 KLC2Q9H0B6 622 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 CA14Q9ULX7 337 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 TBC1D30Q9Y2I9 924 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 MUC22E2RYF6 1773 aaPredicted RBP16.12■□□□□ 0.17
DDX55-203ENST00000421670 A0A0D9SEW6 157 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 TCRBV7S2A1N4TA0A589 114 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 RAMP2O60895 175 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 MZF1P28698 734 aaPredicted RBP16.12■□□□□ 0.17
DDX55-203ENST00000421670 GBE1Q04446 702 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 TFDP2Q14188 446 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 RNF219Q5W0B1 726 aaPredicted RBP16.12■□□□□ 0.17
DDX55-203ENST00000421670 C1orf228Q6PIY5 440 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 ADAT2Q7Z6V5 191 aaKnown RBP16.12■□□□□ 0.17
DDX55-203ENST00000421670 SETD3Q86TU7 594 aaPredicted RBP16.12■□□□□ 0.17
DDX55-203ENST00000421670 SFTPA1Q8IWL2 248 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 ARHGAP12Q8IWW6 846 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 OR7D4Q8NG98 312 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 MS4A14Q96JA4 679 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 MUC3BQ9H195 1237 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 SMARCAL1Q9NZC9 954 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 DEC1Q9P2X7 70 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 SAE1Q9UBE0 346 aaPredicted RBP16.12■□□□□ 0.17
DDX55-203ENST00000421670 GGA2Q9UJY4 613 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 FBXO10Q9UK96 956 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 HEY1Q9Y5J3 304 aa16.12■□□□□ 0.17
DDX55-203ENST00000421670 PECAM1P16284 738 aaPredicted RBP16.11■□□□□ 0.17
DDX55-203ENST00000421670 SERPINB6P35237 376 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 ACVRL1P37023 503 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 AMPD2Q01433 879 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 GNA12Q03113 381 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 PAFAH1B3Q15102 231 aaKnown RBP16.11■□□□□ 0.17
DDX55-203ENST00000421670 GEN1Q17RS7 908 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 SLC44A4Q53GD3 710 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 GRAMD4Q6IC98 578 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 TPRG1Q6ZUI0 275 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 BBS12Q6ZW61 710 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 UMODL1-AS1Q8N2C9 162 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 PHTF2Q8N3S3 785 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 LMLNQ96KR4 655 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 UHRF1Q96T88 793 aaPredicted RBP16.11■□□□□ 0.17
DDX55-203ENST00000421670 SLC2A11Q9BYW1 496 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 RETREG1Q9H6L5 497 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 LRRC19Q9H756 370 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 KIAA1522Q9P206 1035 aaPredicted RBP16.11■□□□□ 0.17
DDX55-203ENST00000421670 SAR1BQ9Y6B6 198 aa16.11■□□□□ 0.17
DDX55-203ENST00000421670 MYO18AQ92614 2054 aaKnown RBP16.11■□□□□ 0.17
DDX55-203ENST00000421670 ILVBLA1L0T0 632 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 RASA4BC9J798 803 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 KIF2AO00139 706 aaPredicted RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 DFFAO00273 331 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 RASA4O43374 803 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 TJP3O95049 919 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 FGGP02679 453 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 CISD3P0C7P0 127 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 PABPC1P11940 636 aaKnown RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 TCP1P17987 556 aaKnown RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 CD72P21854 359 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 SLC10A2Q12908 348 aaPredicted RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 KLF1Q13351 362 aaPredicted RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 POLD3Q15054 466 aaPredicted RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 MLF2Q15773 248 aaPredicted RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 FUT11Q495W5 492 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 CCDC181Q5TID7 509 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 RALGPS2Q86X27 583 aaPredicted RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 SLC13A5Q86YT5 568 aaPredicted RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 APCDD1Q8J025 514 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 ZNF557Q8N988 423 aaPredicted RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 HMCESQ96FZ2 354 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 PBKQ96KB5 322 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 CAPZA3Q96KX2 299 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 PNKPQ96T60 521 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 FAM118BQ9BPY3 351 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 SLC39A8Q9C0K1 460 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms