RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SLC8A1P32418 973 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 CTSKP43235 329 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 VASPP50552 380 aaPredicted RBP17.91■□□□□ 0.46
MSH6-203ENST00000420813 SNX16P57768 344 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 ELAVL3Q14576 367 aaKnown RBP17.91■□□□□ 0.46
MSH6-203ENST00000420813 CAMK4Q16566 473 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 NCEH1Q6PIU2 408 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 C11orf57Q6ZUT1 292 aaPredicted RBP17.91■□□□□ 0.46
MSH6-203ENST00000420813 ADAT2Q7Z6V5 191 aaKnown RBP17.91■□□□□ 0.46
MSH6-203ENST00000420813 SLCO6A1Q86UG4 719 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 PNPLA1Q8N8W4 532 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 RHBDD1Q8TEB9 315 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 PTPRN2Q92932 1015 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 RPL10LQ96L21 214 aaKnown RBP17.91■□□□□ 0.46
MSH6-203ENST00000420813 FAM129BQ96TA1 746 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 ACE2Q9BYF1 805 aaPredicted RBP17.91■□□□□ 0.46
MSH6-203ENST00000420813 NEUROG2Q9H2A3 272 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 FAM47DPA6NHR8 397 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 RNASEH2AO75792 299 aaKnown RBP17.9■□□□□ 0.46
MSH6-203ENST00000420813 DKK1O94907 266 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 CAPNS1P04632 268 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 GRK6P43250 576 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 MTIF2P46199 727 aaKnown RBP17.9■□□□□ 0.46
MSH6-203ENST00000420813 CCR5P51681 352 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 APBA1Q02410 837 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 CXorf57Q6NSI4 855 aaKnown RBP17.9■□□□□ 0.46
MSH6-203ENST00000420813 OLFML1Q6UWY5 402 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 LAYNQ6UX15 382 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 CCNI2Q6ZMN8 369 aaPredicted RBP17.9■□□□□ 0.46
MSH6-203ENST00000420813 SND1Q7KZF4 910 aaKnown RBP eCLIP17.9■□□□□ 0.46
MSH6-203ENST00000420813 SLC26A9Q7LBE3 791 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 RNF34Q969K3 372 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 SKA1Q96BD8 255 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 SIX2Q9NPC8 291 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 TOR4AQ9NXH8 423 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 FREM2Q5SZK8 3169 aa17.9■□□□□ 0.46
MSH6-203ENST00000420813 KNTC1P50748 2209 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 H0Y8X5 98 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 DAB1O75553 588 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 PDGFRAP16234 1089 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 GOT1P17174 413 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 MZF1P28698 734 aaPredicted RBP17.89■□□□□ 0.45
MSH6-203ENST00000420813 PSMD8P48556 350 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 STK19P49842 368 aaPredicted RBP17.89■□□□□ 0.45
MSH6-203ENST00000420813 C21orf59P57076 290 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 MAN2A1Q16706 1144 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 INAVAQ3KP66 663 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 OR6B2Q6IFH4 312 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 FBXL22Q6P050 247 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 FAM183BPQ6ZVS7 135 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 ZDHHC17Q8IUH5 632 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 PASD1Q8IV76 773 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 FAM114A1Q8IWE2 563 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 STK40Q8N2I9 435 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 AADATQ8N5Z0 425 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 C1orf131Q8NDD1 294 aaKnown RBP17.89■□□□□ 0.45
MSH6-203ENST00000420813 ZNF397Q8NF99 534 aaPredicted RBP17.89■□□□□ 0.45
MSH6-203ENST00000420813 RPRD1AQ96P16 312 aaPredicted RBP17.89■□□□□ 0.45
MSH6-203ENST00000420813 SPAG5Q96R06 1193 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 RRN3Q9NYV6 651 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 BTBD3Q9Y2F9 522 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 DSPP15924 2871 aaKnown RBP17.89■□□□□ 0.45
MSH6-203ENST00000420813 ZFYVE26Q68DK2 2539 aa17.89■□□□□ 0.45
MSH6-203ENST00000420813 SYNJ2BP-COX16A0A087WUM0 186 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 GRAP2O75791 330 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 ERBB2P04626 1255 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 PRKCSHP14314 528 aaPredicted RBP17.88■□□□□ 0.45
MSH6-203ENST00000420813 NOS2P35228 1153 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 KRT9P35527 623 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 ADPRHP54922 357 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 SLC6A3Q01959 620 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 AUHQ13825 339 aaKnown RBP17.88■□□□□ 0.45
MSH6-203ENST00000420813 KCNJ12Q14500 433 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 TPD52L1Q16890 204 aaPredicted RBP17.88■□□□□ 0.45
MSH6-203ENST00000420813 C5orf22Q49AR2 442 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 PTPN20Q4JDL3 420 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 KCNT1Q5JUK3 1230 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 LRSAM1Q6UWE0 723 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 DSG4Q86SJ6 1040 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 CIR1Q86X95 450 aaPredicted RBP17.88■□□□□ 0.45
MSH6-203ENST00000420813 PROSER1Q86XN7 944 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 FRS2Q8WU20 508 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 FAM131CQ96AQ9 280 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 ALG14Q96F25 216 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 SLC6A18Q96N87 628 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 COX16Q9P0S2 106 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 DNAJC12Q9UKB3 198 aa17.88■□□□□ 0.45
MSH6-203ENST00000420813 AJAP1Q9UKB5 411 aaPredicted RBP17.88■□□□□ 0.45
MSH6-203ENST00000420813 A0A1B0GTQ1 180 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 FOXN3O00409 490 aaPredicted RBP17.87■□□□□ 0.45
MSH6-203ENST00000420813 KCNK3O14649 394 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 SLC7A4O43246 635 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 TNFSF14O43557 240 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 IL1BP01584 269 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 ATXN1LP0C7T5 689 aaKnown RBP17.87■□□□□ 0.45
MSH6-203ENST00000420813 CLCN1P35523 988 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 BPIFB4P59827 614 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 CENPCQ03188 943 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 SCAPQ12770 1279 aa17.87■□□□□ 0.45
MSH6-203ENST00000420813 NME3Q13232 169 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms