RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 STIP1P31948 543 aaKnown RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 FDFT1P37268 417 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ETFBP38117 255 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 HSPA9P38646 679 aaKnown RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 GARSP41250 739 aaKnown RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 LMAN1P49257 510 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 PGFP49763 221 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 GDF10P55107 478 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ARL4CP56559 192 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 SMAD3P84022 425 aaKnown RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 CYP4F8P98187 520 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 EIF4EBP2Q13542 120 aaPredicted RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 AUHQ13825 339 aaKnown RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 HIF1AQ16665 826 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 SPDYCQ5MJ68 293 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 FAM72AQ5TYM5 149 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 DENND2CQ68D51 928 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ZNF787Q6DD87 383 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 FAM109BQ6ICB4 259 aaPredicted RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 FAM72DQ6L9T8 149 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 LILRA6Q6PI73 481 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 SPATA31D4Q6ZUB0 917 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 CHST9Q7L1S5 443 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 TFAP2DQ7Z6R9 452 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 FAM72BQ86X60 149 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ZNF354CQ86Y25 554 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 LRRC49Q8IUZ0 686 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 CCDC117Q8IWD4 279 aaPredicted RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 CCDC13Q8IYE1 715 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 TDHQ8IZJ6 230 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 LGI2Q8N0V4 545 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ZCCHC9Q8N567 271 aaKnown RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 NPWQ8N729 165 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 CCNYQ8ND76 341 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 FBXO25Q8TCJ0 367 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 NSMCE1Q8WV22 266 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 UBLCP1Q8WVY7 318 aaPredicted RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ARNTL2Q8WYA1 636 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ART4Q93070 314 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 EXOC4Q96A65 974 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 PKNOX2Q96KN3 472 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 C1orf74Q96LT6 269 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 TTC25Q96NG3 672 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 VAT1Q99536 393 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 CDCA3Q99618 268 aaPredicted RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 CORO1BQ9BR76 489 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 PBX4Q9BYU1 374 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 FRMD8Q9BZ67 464 aaPredicted RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ATXN3LQ9H3M9 355 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 RETREG1Q9H6L5 497 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 SLC28A3Q9HAS3 691 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ANLNQ9NQW6 1124 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ZDHHC18Q9NUE0 388 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ETNK2Q9NVF9 386 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 TMEM248Q9NWD8 314 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 SMPD4Q9NXE4 827 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 TPX2Q9ULW0 747 aaKnown RBP6.12□□□□□ -1.43
HMGB3-202ENST00000419110 ZNF510Q9Y2H8 683 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 SH3BP1Q9Y3L3 701 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 MFHAS1Q9Y4C4 1052 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 CPQQ9Y646 472 aa6.12□□□□□ -1.43
HMGB3-202ENST00000419110 TICRRQ7Z2Z1 1910 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 MUC22E2RYF6 1773 aaPredicted RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 IGLV3-10A0A075B6K4 115 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 A0A1W2PRU2 124 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 C2orf78A6NCI8 922 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 WASH4PA8MWX3 477 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 ZNF197O14709 1029 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 RFPL2O75678 378 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 TBX18O95935 607 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 F11P03951 625 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 RHOP08100 348 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 RHOCP08134 193 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 EPCAMP16422 314 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 TPSB2P20231 275 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 DNAJB1P25685 340 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 IRS1P35568 1242 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 AVPR1AP37288 418 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 KCNQ1P51787 676 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 NDST2P52849 883 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 PMS2P54278 862 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 EPHA5P54756 1037 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 SLC7A9P82251 487 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 SARNPP82979 210 aaKnown RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 RBM10P98175 930 aaKnown RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 DHX9Q08211 1270 aaKnown RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 USP4Q13107 963 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 CDH18Q13634 790 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 TPSAB1Q15661 275 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 DUSP6Q16828 381 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 PARP15Q460N3 678 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 DNAJC21Q5F1R6 531 aaKnown RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 C6orf118Q5T5N4 469 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 GPR158Q5T848 1215 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 COL13A1Q5TAT6 717 aaPredicted RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 RNASEH2BQ5TBB1 312 aaKnown RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 HIBCHQ6NVY1 386 aaPredicted RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 ZDHHC24Q6UX98 284 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 LIAT1Q6ZQX7 453 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 TRIM67Q6ZTA4 783 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 404.4 ms