RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 HTR7P34969 479 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 NBL1P41271 181 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 VASPP50552 380 aaPredicted RBP19.18■□□□□ 0.66
PTCD3-204ENST00000418628 DGKEP52429 567 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 NHLH1Q02575 133 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 E2F5Q15329 346 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 SCYL2Q6P3W7 929 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 APCDD1Q8J025 514 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 KDM1BQ8NB78 822 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 RFFLQ8WZ73 363 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 TBC1D31Q96DN5 1066 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 HHIPQ96QV1 700 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 CIPCQ9C0C6 399 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 OSGEPQ9NPF4 335 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 TMEM248Q9NWD8 314 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 ZSCAN32Q9NX65 697 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 CACNA2D2Q9NY47 1150 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 USP18Q9UMW8 372 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 AP4E1Q9UPM8 1137 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 SLC8A2Q9UPR5 921 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 PCDHGA2Q9Y5H1 932 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 STON1Q9Y6Q2 735 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 RIF1Q5UIP0 2472 aaKnown RBP19.18■□□□□ 0.66
PTCD3-204ENST00000418628 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.17■□□□□ 0.66
PTCD3-204ENST00000418628 HOXB2P14652 356 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 RHOQP17081 205 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 PRKCHP24723 683 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 MAN1A1P33908 653 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 ZNF177Q13360 481 aaPredicted RBP19.17■□□□□ 0.66
PTCD3-204ENST00000418628 CA9Q16790 459 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 ERMARDQ5T6L9 678 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 RAD9BQ6WBX8 426 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 ZNF783Q6ZMS7 281 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 CCDC117Q8IWD4 279 aaPredicted RBP19.17■□□□□ 0.66
PTCD3-204ENST00000418628 CHPFQ8IZ52 775 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 PSMB7Q99436 277 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 FEM1AQ9BSK4 669 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 CTTNBP2NLQ9P2B4 639 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 LCMT1Q9UIC8 334 aa19.17■□□□□ 0.66
PTCD3-204ENST00000418628 DOCK9Q9BZ29 2069 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 ILVBLA1L0T0 632 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 WASH4PA8MWX3 477 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 WASH3PC4AMC7 463 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 MYO1FO00160 1098 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 PRPSAP2O60256 369 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 SRGAP2O75044 1071 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 PROSCO94903 275 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 NDUFA10O95299 355 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 APBB3O95704 486 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 POLR2EP19388 210 aaKnown RBP19.16■□□□□ 0.66
PTCD3-204ENST00000418628 CYLC1P35663 651 aaPredicted RBP19.16■□□□□ 0.66
PTCD3-204ENST00000418628 MAPKAPK2P49137 400 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 NRLP54845 237 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 HADHBP55084 474 aaKnown RBP19.16■□□□□ 0.66
PTCD3-204ENST00000418628 DPYSL2Q16555 572 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 KIAA1211LQ6NV74 962 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 TFAP2DQ7Z6R9 452 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 WDR5BQ86VZ2 330 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 CPNE8Q86YQ8 564 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 RHOT2Q8IXI1 618 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 SPC24Q8NBT2 197 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 TSTD1Q8NFU3 115 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 SLC35G2Q8TBE7 412 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 CYB5D2Q8WUJ1 264 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 TEKT4Q8WW24 435 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 KCTD15Q96SI1 283 aaPredicted RBP19.16■□□□□ 0.66
PTCD3-204ENST00000418628 NDFIP2Q9NV92 336 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 GPATCH2LQ9NWQ4 482 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 PCSK1NQ9UHG2 260 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 REXO2Q9Y3B8 237 aaKnown RBP19.16■□□□□ 0.66
PTCD3-204ENST00000418628 EPN1Q9Y6I3 576 aaPredicted RBP19.16■□□□□ 0.66
PTCD3-204ENST00000418628 GON4LQ3T8J9 2241 aa19.16■□□□□ 0.66
PTCD3-204ENST00000418628 PROB1E7EW31 1015 aa19.15■□□□□ 0.66
PTCD3-204ENST00000418628 MOCS3O95396 460 aa19.15■□□□□ 0.66
PTCD3-204ENST00000418628 ATP5BP06576 529 aaKnown RBP19.15■□□□□ 0.66
PTCD3-204ENST00000418628 SRPRAP08240 638 aaKnown RBP19.15■□□□□ 0.66
PTCD3-204ENST00000418628 CTSOP43234 321 aaPredicted RBP19.15■□□□□ 0.66
PTCD3-204ENST00000418628 C6orf118Q5T5N4 469 aa19.15■□□□□ 0.66
PTCD3-204ENST00000418628 TXNRD3NBQ6F5E7 133 aa19.15■□□□□ 0.66
PTCD3-204ENST00000418628 LONP2Q86WA8 852 aa19.15■□□□□ 0.66
PTCD3-204ENST00000418628 RTL3Q8N8U3 475 aaKnown RBP19.15■□□□□ 0.66
PTCD3-204ENST00000418628 MDGA1Q8NFP4 955 aa19.15■□□□□ 0.66
PTCD3-204ENST00000418628 FAM71BQ8TC56 605 aa19.15■□□□□ 0.66
PTCD3-204ENST00000418628 EPAS1Q99814 870 aa19.15■□□□□ 0.66
PTCD3-204ENST00000418628 NOL6Q9H6R4 1146 aaKnown RBP19.15■□□□□ 0.66
PTCD3-204ENST00000418628 GRPEL1Q9HAV7 217 aa19.15■□□□□ 0.66
PTCD3-204ENST00000418628 ERVW-1Q9UQF0 538 aa19.15■□□□□ 0.66
PTCD3-204ENST00000418628 A0A0D9SEW6 157 aa19.14■□□□□ 0.65
PTCD3-204ENST00000418628 CXorf51AA0A1B0GTR3 108 aa19.14■□□□□ 0.65
PTCD3-204ENST00000418628 RHOCP08134 193 aa19.14■□□□□ 0.65
PTCD3-204ENST00000418628 OR1E1P30953 314 aa19.14■□□□□ 0.65
PTCD3-204ENST00000418628 WASP42768 502 aa19.14■□□□□ 0.65
PTCD3-204ENST00000418628 FNTBP49356 437 aa19.14■□□□□ 0.65
PTCD3-204ENST00000418628 ZNF135P52742 658 aaPredicted RBP19.14■□□□□ 0.65
PTCD3-204ENST00000418628 SULT2A1Q06520 285 aa19.14■□□□□ 0.65
PTCD3-204ENST00000418628 CAMK2GQ13555 558 aaPredicted RBP19.14■□□□□ 0.65
PTCD3-204ENST00000418628 RNF219Q5W0B1 726 aaPredicted RBP19.14■□□□□ 0.65
PTCD3-204ENST00000418628 DCAF4L2Q8NA75 395 aa19.14■□□□□ 0.65
PTCD3-204ENST00000418628 BAG1Q99933 345 aaPredicted RBP19.14■□□□□ 0.65
PTCD3-204ENST00000418628 FAM86C1Q9NVL1 165 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms