RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 SULT2A1Q06520 285 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 ARID5BQ14865 1188 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 CLEC16AQ2KHT3 1053 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 KLHL40Q2TBA0 621 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 PPM1JQ5JR12 505 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 ACBD5Q5T8D3 534 aaPredicted RBP16.09■□□□□ 0.17
ITGB1-204ENST00000417122 DAB2IPQ5VWQ8 1189 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 C1orf74Q96LT6 269 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 AGPAT1Q99943 283 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 RSPH9Q9H1X1 276 aaPredicted RBP16.09■□□□□ 0.17
ITGB1-204ENST00000417122 TMPRSS4Q9NRS4 437 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 SEPT11Q9NVA2 429 aaKnown RBP16.09■□□□□ 0.17
ITGB1-204ENST00000417122 SLCO3A1Q9UIG8 710 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 SLC6A14Q9UN76 642 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 SNX10Q9Y5X0 201 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 ITIH6Q6UXX5 1313 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 PI4KAP42356 2102 aa16.09■□□□□ 0.17
ITGB1-204ENST00000417122 EDDM13A0A1B0GTR0 161 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 SYCE3A1L190 88 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 TARSL2A2RTX5 802 aaKnown RBP16.08■□□□□ 0.16
ITGB1-204ENST00000417122 METTL12A8MUP2 240 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 RNASEH1O60930 286 aaKnown RBP16.08■□□□□ 0.16
ITGB1-204ENST00000417122 CNTN5O94779 1100 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 ENDOD1O94919 500 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 CCDC172P0C7W6 258 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 FERP16591 822 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 STK19P49842 368 aaPredicted RBP16.08■□□□□ 0.16
ITGB1-204ENST00000417122 GSCP56915 257 aaPredicted RBP16.08■□□□□ 0.16
ITGB1-204ENST00000417122 ATP11AP98196 1134 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 PTP4A2Q12974 167 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 IQCB1Q15051 598 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 TTC31Q49AM3 519 aaPredicted RBP16.08■□□□□ 0.16
ITGB1-204ENST00000417122 ALFQ53S48 1182 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 C9orf64Q5T6V5 341 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 DCAF12L1Q5VU92 463 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 LRRC31Q6UY01 552 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 FAM131BQ86XD5 332 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 PHF13Q86YI8 300 aaPredicted RBP16.08■□□□□ 0.16
ITGB1-204ENST00000417122 ZNF683Q8IZ20 524 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 OR52K2Q8NGK3 314 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 RXFP2Q8WXD0 754 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 ALG14Q96F25 216 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 FEM1AQ9BSK4 669 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 CAPN10Q9HC96 672 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 ADAM22Q9P0K1 906 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 SUSD2Q9UGT4 822 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 TBC1D30Q9Y2I9 924 aa16.08■□□□□ 0.16
ITGB1-204ENST00000417122 C2CD4BA6NLJ0 364 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 DRGXA6NNA5 263 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 GJB6O95452 261 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 CALB1P05937 261 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 GNSP15586 552 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 KCNA4P22459 653 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 SDC4P31431 198 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 ACSL1P33121 698 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 MAPK8P45983 427 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 GFPT1Q06210 699 aaPredicted RBP16.07■□□□□ 0.16
ITGB1-204ENST00000417122 CDO1Q16878 200 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 C15orf59Q2T9L4 293 aaPredicted RBP16.07■□□□□ 0.16
ITGB1-204ENST00000417122 CCDC14Q49A88 953 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 JOSD2Q8TAC2 188 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 DNASE2BQ8WZ79 361 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 PTPRN2Q92932 1015 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 HAPLN3Q96S86 360 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 SELENOOQ9BVL4 669 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 BTBD1Q9H0C5 482 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 MUC3BQ9H195 1237 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 FSCN3Q9NQT6 498 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 SLC25A13Q9UJS0 675 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 MYO6Q9UM54 1294 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 SCML1Q9UN30 329 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 OR51B4Q9Y5P0 310 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 PCDH15Q96QU1 1955 aa16.07■□□□□ 0.16
ITGB1-204ENST00000417122 DOCK4Q8N1I0 1966 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 IGLV3-10A0A075B6K4 115 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 A0A1B0GTH6 734 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 E9PAM4 449 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 SRGAP2O75044 1071 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 RHOCP08134 193 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 KRT3P12035 628 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 PTPN9P43378 593 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 VASPP50552 380 aaPredicted RBP16.06■□□□□ 0.16
ITGB1-204ENST00000417122 ATXN3P54252 364 aaPredicted RBP16.06■□□□□ 0.16
ITGB1-204ENST00000417122 UAP1L1Q3KQV9 507 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 RAB6CQ53S08 254 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 USP30Q70CQ3 517 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 MON1BQ7L1V2 547 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 IRF2BP2Q7Z5L9 587 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 SETD3Q86TU7 594 aaPredicted RBP16.06■□□□□ 0.16
ITGB1-204ENST00000417122 MMAAQ8IVH4 418 aaKnown RBP16.06■□□□□ 0.16
ITGB1-204ENST00000417122 C3orf20Q8ND61 904 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 BAP1Q92560 729 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 NAP1L5Q96NT1 182 aaPredicted RBP16.06■□□□□ 0.16
ITGB1-204ENST00000417122 GTPBP2Q9BX10 602 aaKnown RBP16.06■□□□□ 0.16
ITGB1-204ENST00000417122 RAB6CQ9H0N0 254 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 MIR1-1HGQ9H1L0 117 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 PCED1AQ9H1Q7 454 aa16.06■□□□□ 0.16
ITGB1-204ENST00000417122 PABPC3Q9H361 631 aaKnown RBP16.06■□□□□ 0.16
ITGB1-204ENST00000417122 C6orf106Q9H6K1 298 aaPredicted RBP16.06■□□□□ 0.16
ITGB1-204ENST00000417122 SGK2Q9HBY8 427 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms