RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 AADATQ8N5Z0 425 aa10.37□□□□□ -0.75
MDC1-202ENST00000416571 MFSD2AQ8NA29 543 aa10.37□□□□□ -0.75
MDC1-202ENST00000416571 TSC1Q92574 1164 aa10.37□□□□□ -0.75
MDC1-202ENST00000416571 LMLNQ96KR4 655 aa10.37□□□□□ -0.75
MDC1-202ENST00000416571 RPL10LQ96L21 214 aaKnown RBP10.37□□□□□ -0.75
MDC1-202ENST00000416571 SPATA32Q96LK8 384 aa10.37□□□□□ -0.75
MDC1-202ENST00000416571 LGMNQ99538 433 aa10.37□□□□□ -0.75
MDC1-202ENST00000416571 TSG101Q99816 390 aa10.37□□□□□ -0.75
MDC1-202ENST00000416571 MIS12Q9H081 205 aa10.37□□□□□ -0.75
MDC1-202ENST00000416571 TJP2Q9UDY2 1190 aa10.37□□□□□ -0.75
MDC1-202ENST00000416571 HPSEQ9Y251 543 aa10.37□□□□□ -0.75
MDC1-202ENST00000416571 LATO43561 262 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 SDC3O75056 442 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 CENPBP07199 599 aaPredicted RBP10.36□□□□□ -0.75
MDC1-202ENST00000416571 PAEPP09466 180 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 PLA2G2AP14555 144 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 ACP1P24666 158 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 MZF1P28698 734 aaPredicted RBP10.36□□□□□ -0.75
MDC1-202ENST00000416571 MAT2AP31153 395 aaKnown RBP10.36□□□□□ -0.75
MDC1-202ENST00000416571 NUDT1P36639 197 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 NDUFA8P51970 172 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 MCCD1P59942 119 aaPredicted RBP10.36□□□□□ -0.75
MDC1-202ENST00000416571 PPP2CBP62714 309 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 PPP2CAP67775 309 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 KRT85P78386 507 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 E2F1Q01094 437 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 CFHR1Q03591 330 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 OVGP1Q12889 678 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 NNTQ13423 1086 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 STILQ15468 1287 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 TBC1D25Q3MII6 688 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 PKDCCQ504Y2 493 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 SETMARQ53H47 684 aaPredicted RBP10.36□□□□□ -0.75
MDC1-202ENST00000416571 TAF1BQ53T94 588 aaPredicted RBP10.36□□□□□ -0.75
MDC1-202ENST00000416571 DCAF6Q58WW2 860 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 BROXQ5VW32 411 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 FAM46CQ5VWP2 391 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 KRBA2Q6ZNG9 492 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 DSG4Q86SJ6 1040 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 IQCHQ86VS3 1027 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 CHSY1Q86X52 802 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 LGI2Q8N0V4 545 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 CACTIN-AS1Q8N1I8 211 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 ZNF248Q8NDW4 579 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 DQX1Q8TE96 717 aaKnown RBP10.36□□□□□ -0.75
MDC1-202ENST00000416571 CLEC4CQ8WTT0 213 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 SLC35F5Q8WV83 523 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 FAM149B1Q96BN6 582 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 FCRL2Q96LA5 508 aaPredicted RBP10.36□□□□□ -0.75
MDC1-202ENST00000416571 HSFY1Q96LI6 401 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 SPAG5Q96R06 1193 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 FAM129BQ96TA1 746 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 NUCKS1Q9H1E3 243 aaKnown RBP10.36□□□□□ -0.75
MDC1-202ENST00000416571 KDM4CQ9H3R0 1056 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 ST7Q9NRC1 585 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 SLCO3A1Q9UIG8 710 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 DMTF1Q9Y222 760 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 TLR6Q9Y2C9 796 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 COQ4Q9Y3A0 265 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 PCDHB4Q9Y5E5 795 aa10.36□□□□□ -0.75
MDC1-202ENST00000416571 ANKRD17O75179 2603 aaKnown RBP10.36□□□□□ -0.75
MDC1-202ENST00000416571 PTPN13Q12923 2485 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 PTPRQQ9UMZ3 2332 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 SPTA1P02549 2419 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 PIEZO2Q9H5I5 2752 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 F5H5T6 163 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 SLC16A3O15427 465 aaKnown RBP10.35□□□□□ -0.75
MDC1-202ENST00000416571 SLC7A4O43246 635 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 SART1O43290 800 aaKnown RBP10.35□□□□□ -0.75
MDC1-202ENST00000416571 MT-CO3P00414 261 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 NUMBP49757 651 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 STK19P49842 368 aaPredicted RBP10.35□□□□□ -0.75
MDC1-202ENST00000416571 PCBP4P57723 403 aaKnown RBP10.35□□□□□ -0.75
MDC1-202ENST00000416571 INSM1Q01101 510 aaPredicted RBP10.35□□□□□ -0.75
MDC1-202ENST00000416571 TLE3Q04726 772 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 SULT2A1Q06520 285 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 SLC12A1Q13621 1099 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 CNGA2Q16280 664 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 ACCSLQ4AC99 568 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 RAP1GAP2Q684P5 730 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 SPATS2Q86XZ4 545 aaKnown RBP10.35□□□□□ -0.75
MDC1-202ENST00000416571 SPACA3Q8IXA5 215 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 SMYD4Q8IYR2 804 aaPredicted RBP10.35□□□□□ -0.75
MDC1-202ENST00000416571 APCDD1Q8J025 514 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 ZNF843Q8N446 348 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 RFFLQ8WZ73 363 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 OR8D1Q8WZ84 308 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 TFAP2BQ92481 460 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 PTPRN2Q92932 1015 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 MYEOVQ96EZ4 313 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 KLHDC7BQ96G42 594 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 NT5C1BQ96P26 610 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 TRIM62Q9BVG3 475 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 ARMCX3Q9UH62 379 aaPredicted RBP10.35□□□□□ -0.75
MDC1-202ENST00000416571 CYTH4Q9UIA0 394 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 SLC25A13Q9UJS0 675 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 NAALADL1Q9UQQ1 740 aa10.35□□□□□ -0.75
MDC1-202ENST00000416571 C1QTNF3-AMACRE9PGA6 284 aa10.34□□□□□ -0.75
MDC1-202ENST00000416571 PRAMEF26H0Y7S4 382 aa10.34□□□□□ -0.75
MDC1-202ENST00000416571 ERVH48-1M5A8F1 160 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms