RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 FSCBQ5H9T9 825 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 ZFYVE27Q5T4F4 411 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 ASTLQ6HA08 431 aaPredicted RBP13.64□□□□□ -0.23
CNN3-203ENST00000415017 RWDD4Q6NW29 188 aaKnown RBP13.64□□□□□ -0.23
CNN3-203ENST00000415017 TMCO3Q6UWJ1 677 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 RFX6Q8HWS3 928 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 LRRC49Q8IUZ0 686 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 ZNF557Q8N988 423 aaPredicted RBP13.64□□□□□ -0.23
CNN3-203ENST00000415017 TTC13Q8NBP0 860 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 ST13P5Q8NFI4 369 aaPredicted RBP13.64□□□□□ -0.23
CNN3-203ENST00000415017 WFDC5Q8TCV5 224 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 MAIP1Q8WWC4 291 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 FATE1Q969F0 183 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 NKD2Q969F2 451 aaPredicted RBP13.64□□□□□ -0.23
CNN3-203ENST00000415017 RPGRIP1Q96KN7 1286 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 TSGA13Q96PP4 275 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 NAP1L3Q99457 506 aaPredicted RBP13.64□□□□□ -0.23
CNN3-203ENST00000415017 MAK16Q9BXY0 300 aaKnown RBP13.64□□□□□ -0.23
CNN3-203ENST00000415017 ACE2Q9BYF1 805 aaPredicted RBP13.64□□□□□ -0.23
CNN3-203ENST00000415017 FRMD8P1Q9BZ68 369 aaPredicted RBP13.64□□□□□ -0.23
CNN3-203ENST00000415017 MAGEH1Q9H213 219 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 EBF3Q9H4W6 596 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 LIMD1Q9UGP4 676 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 R3HDM2Q9Y2K5 976 aaKnown RBP13.64□□□□□ -0.23
CNN3-203ENST00000415017 SLC27A6Q9Y2P4 619 aa13.64□□□□□ -0.23
CNN3-203ENST00000415017 A0A0A0MRY4 1105 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.63□□□□□ -0.23
CNN3-203ENST00000415017 NCAM2O15394 837 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 DAPK3O43293 454 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 URI1O94763 535 aaPredicted RBP13.63□□□□□ -0.23
CNN3-203ENST00000415017 ADH1CP00326 375 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 CYBBP04839 570 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 ADH5P11766 374 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 TYRP14679 529 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 GDI1P31150 447 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 SERPINB6P35237 376 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 TNK2Q07912 1038 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 ZNF177Q13360 481 aaPredicted RBP13.63□□□□□ -0.23
CNN3-203ENST00000415017 SLC12A1Q13621 1099 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 LLGL1Q15334 1064 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 OASLQ15646 514 aaKnown RBP13.63□□□□□ -0.23
CNN3-203ENST00000415017 LONRF2Q1L5Z9 754 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 PARP15Q460N3 678 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 C6orf118Q5T5N4 469 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 KAZNQ674X7 775 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 NPNTQ6UXI9 565 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 TPGS1Q6ZTW0 290 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 TP53INP2Q8IXH6 220 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 CPA6Q8N4T0 437 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 ACTL9Q8TC94 416 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 DDI1Q8WTU0 396 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 ZNF592Q92610 1267 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 DNASE1L2Q92874 299 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 ARHGEF2Q92974 986 aaKnown RBP13.63□□□□□ -0.23
CNN3-203ENST00000415017 BBS2Q9BXC9 721 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 SLC39A8Q9C0K1 460 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 SLC2A4RGQ9NR83 387 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 SMARCAL1Q9NZC9 954 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 SAE1Q9UBE0 346 aaPredicted RBP13.63□□□□□ -0.23
CNN3-203ENST00000415017 F5P12259 2224 aa13.63□□□□□ -0.23
CNN3-203ENST00000415017 TYW5A2RUC4 315 aaKnown RBP13.62□□□□□ -0.23
CNN3-203ENST00000415017 SHISA7A6NL88 538 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 ZMPSTE24O75844 475 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 PEX11BO96011 259 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 SP100P23497 879 aaPredicted RBP13.62□□□□□ -0.23
CNN3-203ENST00000415017 HLA-FP30511 346 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 OR1E1P30953 314 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 GJA4P35212 333 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 OPRD1P41143 372 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 OXCT1P55809 520 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 OTUD4Q01804 1114 aaKnown RBP13.62□□□□□ -0.23
CNN3-203ENST00000415017 GNA12Q03113 381 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 SERINC3Q13530 473 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 ITPRIPL2Q3MIP1 535 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 BZW1Q7L1Q6 419 aaKnown RBP13.62□□□□□ -0.23
CNN3-203ENST00000415017 TFAP2DQ7Z6R9 452 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 YAF2Q8IY57 180 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.62□□□□□ -0.23
CNN3-203ENST00000415017 P3H4Q92791 437 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 HDAC11Q96DB2 347 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 FEM1AQ9BSK4 669 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 BRD8Q9H0E9 1235 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 RRAGDQ9NQL2 400 aaPredicted RBP13.62□□□□□ -0.23
CNN3-203ENST00000415017 HOMER3Q9NSC5 361 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 GTSE1Q9NYZ3 720 aa13.62□□□□□ -0.23
CNN3-203ENST00000415017 INTS6Q9UL03 887 aaKnown RBP13.62□□□□□ -0.23
CNN3-203ENST00000415017 DRG1Q9Y295 367 aaKnown RBP13.62□□□□□ -0.23
CNN3-203ENST00000415017 A0A0D9SEW6 157 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 RASA4BC9J798 803 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 NEDD8-MDP1E9PL57 170 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 CCDC188H7C350 402 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 RASA4O43374 803 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 LIASO43766 372 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 MAFKO60675 156 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 CHRM1P11229 460 aaPredicted RBP13.61□□□□□ -0.23
CNN3-203ENST00000415017 GLULP15104 373 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 GARSP41250 739 aaKnown RBP13.61□□□□□ -0.23
CNN3-203ENST00000415017 VASPP50552 380 aaPredicted RBP13.61□□□□□ -0.23
CNN3-203ENST00000415017 DYNLT1P63172 113 aa13.61□□□□□ -0.23
CNN3-203ENST00000415017 PPIDQ08752 370 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms