RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 C11orf16Q9NQ32 467 aa18.2■□□□□ 0.5
SBDS-202ENST00000414306 KIAA1522Q9P206 1035 aaPredicted RBP18.2■□□□□ 0.5
SBDS-202ENST00000414306 INTS6Q9UL03 887 aaKnown RBP18.2■□□□□ 0.5
SBDS-202ENST00000414306 SLC27A6Q9Y2P4 619 aa18.2■□□□□ 0.5
SBDS-202ENST00000414306 A0A0D9SEW6 157 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 ZSCAN12O43309 604 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 PSTPIP1O43586 416 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 ERCC2P18074 760 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 ARSEP51690 589 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 FZD5Q13467 585 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 DPYSQ14117 519 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 PREPLQ4J6C6 727 aaPredicted RBP18.19■□□□□ 0.5
SBDS-202ENST00000414306 PITRM1Q5JRX3 1037 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 C6orf118Q5T5N4 469 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 EGFLAMQ63HQ2 1017 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 MBLAC2Q68D91 279 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 NT5DC3Q86UY8 548 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 ADIPOR2Q86V24 386 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 SUGP1Q8IWZ8 645 aaKnown RBP18.19■□□□□ 0.5
SBDS-202ENST00000414306 SYCE1Q8N0S2 351 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 AHI1Q8N157 1196 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 RTL3Q8N8U3 475 aaKnown RBP18.19■□□□□ 0.5
SBDS-202ENST00000414306 OR7D4Q8NG98 312 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 CELF6Q96J87 481 aaKnown RBP18.19■□□□□ 0.5
SBDS-202ENST00000414306 ETNK2Q9NVF9 386 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 TMEM248Q9NWD8 314 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 NYNRINQ9P2P1 1898 aaKnown RBP18.19■□□□□ 0.5
SBDS-202ENST00000414306 AMFRQ9UKV5 643 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 TBC1D30Q9Y2I9 924 aa18.19■□□□□ 0.5
SBDS-202ENST00000414306 FGF10O15520 208 aaPredicted RBP18.18■□□□□ 0.5
SBDS-202ENST00000414306 KDELR1P24390 212 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 CTSOP43234 321 aaPredicted RBP18.18■□□□□ 0.5
SBDS-202ENST00000414306 LRRC32Q14392 662 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 PLEKHG6Q3KR16 790 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 LRRC38Q5VT99 294 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 PKN3Q6P5Z2 889 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 ZNF662Q6ZS27 426 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 C17orf53Q8N3J3 647 aaPredicted RBP18.18■□□□□ 0.5
SBDS-202ENST00000414306 CCDC33Q8N5R6 958 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 ZNF557Q8N988 423 aaPredicted RBP18.18■□□□□ 0.5
SBDS-202ENST00000414306 RPLP0P6Q8NHW5 317 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 TSC1Q92574 1164 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 NELL2Q99435 816 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 FEM1AQ9BSK4 669 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 SPON2Q9BUD6 331 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 POLR3BQ9NW08 1133 aaPredicted RBP18.18■□□□□ 0.5
SBDS-202ENST00000414306 VPS28Q9UK41 221 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 CHD5Q8TDI0 1954 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 POLR2EP19388 210 aaKnown RBP18.18■□□□□ 0.5
SBDS-202ENST00000414306 AOC1P19801 751 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 GLDCP23378 1020 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 IL4RP24394 825 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 CTNNA1P35221 906 aaKnown RBP18.18■□□□□ 0.5
SBDS-202ENST00000414306 ACVRL1P37023 503 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 WASP42768 502 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 PDK2Q15119 407 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 NUDT18Q6ZVK8 323 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 SETD3Q86TU7 594 aaPredicted RBP18.18■□□□□ 0.5
SBDS-202ENST00000414306 ZNF354CQ86Y25 554 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 CCDC50Q8IVM0 306 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 NPWQ8N729 165 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.18■□□□□ 0.5
SBDS-202ENST00000414306 ALS2CR12Q96Q35 445 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 ACOX2Q99424 681 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 ELOVL2Q9NXB9 296 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 DDX56Q9NY93 547 aaKnown RBP18.18■□□□□ 0.5
SBDS-202ENST00000414306 HCN2Q9UL51 889 aa18.18■□□□□ 0.5
SBDS-202ENST00000414306 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.18■□□□□ 0.5
SBDS-202ENST00000414306 MUC22E2RYF6 1773 aaPredicted RBP18.17■□□□□ 0.5
SBDS-202ENST00000414306 CUL9Q8IWT3 2517 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 C3orf70A6NLC5 250 aaPredicted RBP18.17■□□□□ 0.5
SBDS-202ENST00000414306 SNAP91O60641 907 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 RAMP2O60895 175 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 HTR7P34969 479 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 TNFRSF4P43489 277 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 MAPKAPK2P49137 400 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 GNA12Q03113 381 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 ANKRD20A8PQ5CZ79 823 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 DGKKQ5KSL6 1271 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 IL31Q6EBC2 164 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 MFSD7Q6UXD7 560 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 KIAA0907Q7Z7F0 614 aaPredicted RBP18.17■□□□□ 0.5
SBDS-202ENST00000414306 MAP7D3Q8IWC1 876 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 TP53INP2Q8IXH6 220 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 ALLCQ8N6M5 410 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 ZNF513Q8N8E2 541 aaPredicted RBP18.17■□□□□ 0.5
SBDS-202ENST00000414306 TMEM105Q8N8V8 129 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 PCDH19Q8TAB3 1148 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 FAM71BQ8TC56 605 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 WFIKKN2Q8TEU8 576 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 NOL6Q9H6R4 1146 aaKnown RBP18.17■□□□□ 0.5
SBDS-202ENST00000414306 ATP13A1Q9HD20 1204 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 SHROOM3Q8TF72 1996 aa18.17■□□□□ 0.5
SBDS-202ENST00000414306 KMT2EQ8IZD2 1858 aa18.16■□□□□ 0.5
SBDS-202ENST00000414306 A0A0A0MRY4 1105 aa18.16■□□□□ 0.5
SBDS-202ENST00000414306 NCAM2O15394 837 aa18.16■□□□□ 0.5
SBDS-202ENST00000414306 MAP3K6O95382 1288 aa18.16■□□□□ 0.5
SBDS-202ENST00000414306 KLF8O95600 359 aaPredicted RBP18.16■□□□□ 0.5
SBDS-202ENST00000414306 KIR2DL1P43626 348 aaPredicted RBP18.16■□□□□ 0.5
SBDS-202ENST00000414306 HCAR3P49019 387 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms