RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TYW5A2RUC4 315 aaKnown RBP12.57□□□□□ -0.4
LIMS2-210ENST00000413578 M0QYV0 167 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 IGLV3-25P01717 112 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 CENPBP07199 599 aaPredicted RBP12.57□□□□□ -0.4
LIMS2-210ENST00000413578 GPD2P43304 727 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 PSMD8P48556 350 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 STK19P49842 368 aaPredicted RBP12.57□□□□□ -0.4
LIMS2-210ENST00000413578 VASPP50552 380 aaPredicted RBP12.57□□□□□ -0.4
LIMS2-210ENST00000413578 METAP1P53582 386 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 SEMG2Q02383 582 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 STILQ15468 1287 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 PROX2Q3B8N5 592 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 ANKRD40Q6AI12 368 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 TAC4Q86UU9 113 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 OXR1Q8N573 874 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 DCBLD1Q8N8Z6 715 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 MFSD2AQ8NA29 543 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 OR14C36Q8NHC7 312 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 SPATA20Q8TB22 786 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 SLC39A7Q92504 469 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 PRMT1Q99873 361 aaKnown RBP12.57□□□□□ -0.4
LIMS2-210ENST00000413578 ARMCX3Q9UH62 379 aaPredicted RBP12.57□□□□□ -0.4
LIMS2-210ENST00000413578 CYTH4Q9UIA0 394 aa12.57□□□□□ -0.4
LIMS2-210ENST00000413578 ARID1BQ8NFD5 2236 aaPredicted RBP12.57□□□□□ -0.4
LIMS2-210ENST00000413578 PLRG1O43660 514 aaKnown RBP12.56□□□□□ -0.4
LIMS2-210ENST00000413578 ZIC2O95409 532 aaPredicted RBP12.56□□□□□ -0.4
LIMS2-210ENST00000413578 CALCAP01258 141 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 HSP90AA1P07900 732 aaKnown RBP12.56□□□□□ -0.4
LIMS2-210ENST00000413578 VAV1P15498 845 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 CKMT2P17540 419 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 ACP1P24666 158 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 FMO5P49326 533 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 PLK1P53350 603 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 C19orf57Q0VDD7 668 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 OVGP1Q12889 678 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 PNOCQ13519 176 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 SYPL2Q5VXT5 272 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 PCSK4Q6UW60 755 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 RPL10LQ96L21 214 aaKnown RBP12.56□□□□□ -0.4
LIMS2-210ENST00000413578 KDM4CQ9H3R0 1056 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 SARDHQ9UL12 918 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 PCDHB4Q9Y5E5 795 aa12.56□□□□□ -0.4
LIMS2-210ENST00000413578 TRIM49BA6NDI0 452 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 SLC7A4O43246 635 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 MOCS3O95396 460 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 MOCS2O96007 188 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-210ENST00000413578 IL1BP01584 269 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 TACR2P21452 398 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 NUDT1P36639 197 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 INSM1Q01101 510 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-210ENST00000413578 LRRC63Q05C16 580 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 SLC12A1Q13621 1099 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 MEA1Q16626 185 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 SLC45A4Q5BKX6 768 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 ZC3H12AQ5D1E8 599 aaKnown RBP12.55□□□□□ -0.4
LIMS2-210ENST00000413578 ZNF658Q5TYW1 1059 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-210ENST00000413578 AGBL4Q5VU57 503 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 CXorf57Q6NSI4 855 aaKnown RBP12.55□□□□□ -0.4
LIMS2-210ENST00000413578 TRIM69Q86WT6 500 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 ERICH1Q86X53 443 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 LGI2Q8N0V4 545 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 TMEM145Q8NBT3 493 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 FGF11Q92914 225 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 ALG14Q96F25 216 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 BTN2A3PQ96KV6 586 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 NT5C1BQ96P26 610 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 FCRL3Q96P31 734 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-210ENST00000413578 SPAG5Q96R06 1193 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 SLC4A5Q9BY07 1137 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 MIS12Q9H081 205 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 CNTN6Q9UQ52 1028 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 DMTF1Q9Y222 760 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 AK5Q9Y6K8 562 aa12.55□□□□□ -0.4
LIMS2-210ENST00000413578 TBC1D3DA0A087WVF3 549 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TBC1D3IA0A087WXS9 549 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TBC1D3EA0A087X179 549 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TBC1D3KA0A087X1G2 549 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TBC1D3FA6NER0 549 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TBC1D3LB9A6J9 549 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TRIM38O00635 465 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 P4HA2O15460 535 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 RRP8O43159 456 aaKnown RBP12.54□□□□□ -0.4
LIMS2-210ENST00000413578 SART1O43290 800 aaKnown RBP12.54□□□□□ -0.4
LIMS2-210ENST00000413578 BRINP1O60477 761 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 RTN2O75298 545 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TBC1D3HP0C7X1 549 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 PITX1P78337 314 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-210ENST00000413578 GCNT1Q02742 428 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TLE3Q04726 772 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 SULT2A1Q06520 285 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TBC1D25Q3MII6 688 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 RNF219Q5W0B1 726 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-210ENST00000413578 RAP1GAP2Q684P5 730 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TBC1D3GQ6DHY5 549 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 TBC1D3CQ6IPX1 549 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-210ENST00000413578 LRRC69Q6ZNQ3 347 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 CHSY1Q86X52 802 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 ARHGEF19Q8IW93 802 aa12.54□□□□□ -0.4
LIMS2-210ENST00000413578 CCDC117Q8IWD4 279 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms